Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RPL19P16-201ENST00000433839 588 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 AC092447.2-201ENST00000435487 669 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 NANOGP9-201ENST00000439890 892 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 MTCO3P43-201ENST00000440974 771 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 AC016772.1-201ENST00000444170 1261 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 AC073909.1-201ENST00000447112 999 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFT1Q96AA3 RN7SL273P-201ENST00000481561 299 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 AC015864.1-201ENST00000496512 544 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 AC074255.1-201ENST00000511259 501 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 AC091912.1-201ENST00000511351 248 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 Y_RNA.667-201ENST00000516212 107 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 AC018442.3-201ENST00000523025 183 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 PMS2P3-207ENST00000529061 717 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 OR5AM1P-201ENST00000532136 1032 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 AL356801.1-201ENST00000559320 294 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 AP001496.3-201ENST00000580230 913 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 HPVC1-201ENST00000629899 1198 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RFT1Q96AA3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
RFT1Q96AA3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RFT1Q96AA3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RFT1Q96AA3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.84□□□□□ -1.64
RFT1Q96AA3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
RFT1Q96AA3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RFT1Q96AA3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RFT1Q96AA3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.64
RFT1Q96AA3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 MTND4P21-201ENST00000453886 1357 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 RNU6-40P-201ENST00000384254 107 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 SNORD56.6-201ENST00000384569 71 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 AL391422.1-201ENST00000402155 436 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 RNA5SP487-201ENST00000410186 122 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 RPSAP35-201ENST00000413753 818 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 PCNPP4-201ENST00000414817 517 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 RPL7P56-201ENST00000429441 717 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFT1Q96AA3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC090804.1-201ENST00000448870 490 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 RPL5P13-201ENST00000462840 709 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 RPSAP37-201ENST00000470913 821 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC009120.1-201ENST00000493458 473 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC021087.2-201ENST00000504656 1203 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 EIF3KP3-201ENST00000514461 639 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 RN7SKP253-201ENST00000516424 309 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 MTCYBP19-201ENST00000517463 1124 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC021678.3-201ENST00000517893 476 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 CDC42P3-201ENST00000518493 633 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 HMGN2P36-201ENST00000529541 409 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC090022.1-201ENST00000546569 311 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC006349.1-201ENST00000555526 235 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 CD24P2-201ENST00000565486 219 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC114947.2-201ENST00000565748 2125 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC068020.1-201ENST00000594215 661 ntBASIC4.83□□□□□ -1.64
RFT1Q96AA3 AC130352.1-201ENST00000602979 661 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms