Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMGB4Q8WW32 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 CASC19-281ENST00000642118 1554 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 RNA5SP507-201ENST00000363603 121 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 HMGB1P10-201ENST00000395823 563 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 RNA5SP251-201ENST00000410614 137 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 RPL23AP18-201ENST00000416139 468 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 SETP9-201ENST00000423837 832 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 RPL7P33-201ENST00000444159 742 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AC023512.1-201ENST00000444513 499 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 HMGB1P5-202ENST00000451497 985 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AC079841.1-201ENST00000481228 950 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 RPL15P21-201ENST00000495592 567 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 OR5H3P-201ENST00000502817 919 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AC147055.3-201ENST00000510547 851 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AC090424.1-201ENST00000535243 736 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AP002884.5-201ENST00000595053 1132 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 SUMO2P14-201ENST00000604488 293 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 OR4G3P-201ENST00000633500 913 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AC099654.8-201ENST00000637757 681 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AC005725.1-201ENST00000577346 2607 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AL645568.2-201ENST00000432815 1337 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 AC008432.1-201ENST00000615912 1320 ntBASIC5.69□□□□□ -1.5
HMGB4Q8WW32 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
HMGB4Q8WW32 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC107021.2-201ENST00000567714 2095 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC140479.2-201ENST00000421567 3130 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 RNU6-354P-201ENST00000383862 107 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 RNU6-610P-201ENST00000384264 107 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 RPL22P22-201ENST00000395439 379 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 RNU4-74P-201ENST00000411280 161 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AL590806.1-201ENST00000415818 853 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC006994.1-201ENST00000438212 839 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 RPS23P1-201ENST00000491662 432 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 DUTP1-201ENST00000493631 470 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 RN7SL808P-201ENST00000496066 299 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC072052.1-201ENST00000496556 306 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC133963.2-201ENST00000513686 578 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC110760.3-202ENST00000515177 371 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 IGHV3-63-201ENST00000518422 341 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AP003066.2-201ENST00000529375 555 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 OR4A6P-201ENST00000534364 970 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC124283.4-201ENST00000581815 456 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC012616.1-201ENST00000600294 197 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC084373.1-201ENST00000603311 235 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC034236.3-201ENST00000605999 461 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms