Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 MTND4P26-201ENST00000415971 1359 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 AC106872.5-201ENST00000508856 1416 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AL450326.2-201ENST00000421913 1962 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 IL6STP1-201ENST00000346911 1020 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 RPS12P5-201ENST00000423449 371 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC069154.1-201ENST00000432914 542 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 Z84478.1-201ENST00000438230 1219 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC073109.1-201ENST00000445066 978 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 RPL7P40-201ENST00000481703 745 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC021146.3-201ENST00000511911 260 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC078878.1-201ENST00000539832 958 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 YWHABP2-201ENST00000540201 713 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 PDCD5P1-201ENST00000543528 309 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC079600.1-201ENST00000550326 297 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC008814.1-201ENST00000603797 406 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC108359.1-201ENST00000616451 1211 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 MIR8069-1-201ENST00000616627 86 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC009237.17-201ENST00000618111 748 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AL591926.1-201ENST00000620542 217 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 MIR8069-2-201ENST00000621412 86 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 MIR6806-201ENST00000622141 64 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 MAPK10-320ENST00000641462 6696 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC063976.2-201ENST00000425667 3556 ntBASIC4.62□□□□□ -1.67
CCDC58Q4VC31 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCDC58Q4VC31 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 AC019155.1-201ENST00000382242 574 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 OR8V1P-201ENST00000395193 873 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 AL390316.1-201ENST00000406279 553 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 RNA5SP146-201ENST00000410743 123 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 ATG4AP1-201ENST00000416893 538 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 IPMKP1-201ENST00000425988 855 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 AC019185.1-201ENST00000442718 389 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 AL445665.1-202ENST00000452436 324 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 AL445433.1-201ENST00000457507 257 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 AC011476.1-201ENST00000466725 307 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 RN7SL214P-201ENST00000487317 265 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 AC073358.1-201ENST00000505671 684 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 RNA5SP271-201ENST00000516700 88 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 RN7SKP99-201ENST00000517028 307 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 SNX18P1Y-201ENST00000616231 511 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 AC118658.2-201ENST00000618697 459 ntBASIC4.61□□□□□ -1.67
CCDC58Q4VC31 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC58Q4VC31 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms