Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.61□□□□□ -1.67
HCFC1P51610 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.61□□□□□ -1.67
HCFC1P51610 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC4.61□□□□□ -1.67
HCFC1P51610 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HCFC1P51610 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.61□□□□□ -1.67
HCFC1P51610 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.61□□□□□ -1.67
HCFC1P51610 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.61□□□□□ -1.67
HCFC1P51610 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
HCFC1P51610 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 SNORA51.8-201ENST00000384234 132 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 CHMP1B2P-201ENST00000399581 597 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.61□□□□□ -1.67
HCFC1P51610 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.61□□□□□ -1.67
HCFC1P51610 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.61□□□□□ -1.67
HCFC1P51610 RPL7P56-201ENST00000429441 717 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 GSTA7P-201ENST00000438425 448 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.61□□□□□ -1.67
HCFC1P51610 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 ATP5LP5-201ENST00000483050 299 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.61□□□□□ -1.67
HCFC1P51610 RN7SL205P-201ENST00000490174 284 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 AL133372.1-201ENST00000493565 745 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 GAPDHP56-201ENST00000506031 988 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.61□□□□□ -1.67
HCFC1P51610 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 RN7SL52P-201ENST00000584271 284 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 AC018690.1-201ENST00000608144 626 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 RN7SL722P-201ENST00000617780 284 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 RN7SL565P-201ENST00000618246 284 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 AC005618.4-201ENST00000625053 554 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.61□□□□□ -1.67
HCFC1P51610 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
HCFC1P51610 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.61□□□□□ -1.67
HCFC1P51610 AC099654.3-201ENST00000447087 1546 ntBASIC4.61□□□□□ -1.67
HCFC1P51610 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HCFC1P51610 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HCFC1P51610 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCFC1P51610 AC012618.3-205ENST00000637896 1496 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.6□□□□□ -1.67
HCFC1P51610 OR4G1P-202ENST00000641173 1788 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCFC1P51610 Y_RNA.62-201ENST00000362840 99 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCFC1P51610 USP9YP19-201ENST00000412165 485 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 EIF2S2P3-201ENST00000428356 999 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.6□□□□□ -1.67
HCFC1P51610 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.6□□□□□ -1.67
HCFC1P51610 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.6□□□□□ -1.67
HCFC1P51610 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.6□□□□□ -1.67
HCFC1P51610 AL606490.8-201ENST00000441624 319 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCFC1P51610 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.6□□□□□ -1.67
HCFC1P51610 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.6□□□□□ -1.67
HCFC1P51610 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.6□□□□□ -1.67
HCFC1P51610 AC026688.1-201ENST00000520639 1168 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 AC130364.2-201ENST00000528639 604 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.6□□□□□ -1.67
HCFC1P51610 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.6□□□□□ -1.67
HCFC1P51610 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.6□□□□□ -1.67
HCFC1P51610 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.6□□□□□ -1.67
HCFC1P51610 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.6□□□□□ -1.67
HCFC1P51610 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.6□□□□□ -1.67
HCFC1P51610 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.6□□□□□ -1.67
HCFC1P51610 AC099494.2-201ENST00000623371 978 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 AC069542.2-201ENST00000624816 216 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCFC1P51610 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC4.6□□□□□ -1.67
HCFC1P51610 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HCFC1P51610 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCFC1P51610 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HCFC1P51610 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HCFC1P51610 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
HCFC1P51610 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.6□□□□□ -1.67
HCFC1P51610 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.6□□□□□ -1.67
HCFC1P51610 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.6□□□□□ -1.67
HCFC1P51610 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
HCFC1P51610 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.6□□□□□ -1.67
HCFC1P51610 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCFC1P51610 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.6□□□□□ -1.67
HCFC1P51610 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HCFC1P51610 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCFC1P51610 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
HCFC1P51610 RN7SKP185-201ENST00000362813 326 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 RNU6-819P-201ENST00000364116 107 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 MIR192-201ENST00000384915 110 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms