Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CASP4P49662 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CASP4P49662 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CASP4P49662 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CASP4P49662 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CASP4P49662 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.55□□□□□ -1.52
CASP4P49662 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CASP4P49662 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CASP4P49662 U3.36-201ENST00000408418 213 ntBASIC5.55□□□□□ -1.52
CASP4P49662 DPPA2P3-201ENST00000411853 655 ntBASIC5.55□□□□□ -1.52
CASP4P49662 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.55□□□□□ -1.52
CASP4P49662 RPL34P20-201ENST00000442771 351 ntBASIC5.55□□□□□ -1.52
CASP4P49662 AC090602.1-201ENST00000469695 252 ntBASIC5.55□□□□□ -1.52
CASP4P49662 AC135999.1-201ENST00000478962 479 ntBASIC5.55□□□□□ -1.52
CASP4P49662 AC090114.3-201ENST00000479267 829 ntBASIC5.55□□□□□ -1.52
CASP4P49662 DEFB109A-201ENST00000482450 265 ntBASIC5.55□□□□□ -1.52
CASP4P49662 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.55□□□□□ -1.52
CASP4P49662 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.55□□□□□ -1.52
CASP4P49662 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.55□□□□□ -1.52
CASP4P49662 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.55□□□□□ -1.52
CASP4P49662 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.55□□□□□ -1.52
CASP4P49662 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.55□□□□□ -1.52
CASP4P49662 AL359219.2-201ENST00000555184 348 ntBASIC5.55□□□□□ -1.52
CASP4P49662 AC127024.5-201ENST00000580085 462 ntBASIC5.55□□□□□ -1.52
CASP4P49662 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.55□□□□□ -1.52
CASP4P49662 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.55□□□□□ -1.52
CASP4P49662 AC099494.2-201ENST00000623371 978 ntBASIC5.55□□□□□ -1.52
CASP4P49662 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.55□□□□□ -1.52
CASP4P49662 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CASP4P49662 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CASP4P49662 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.55□□□□□ -1.52
CASP4P49662 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
CASP4P49662 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.55□□□□□ -1.52
CASP4P49662 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.55□□□□□ -1.52
CASP4P49662 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CASP4P49662 AC007342.5-201ENST00000571340 2142 ntBASIC5.54□□□□□ -1.52
CASP4P49662 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CASP4P49662 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CASP4P49662 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CASP4P49662 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CASP4P49662 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CASP4P49662 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CASP4P49662 U8.4-201ENST00000363626 134 ntBASIC5.54□□□□□ -1.52
CASP4P49662 AC013442.1-201ENST00000397347 228 ntBASIC5.54□□□□□ -1.52
CASP4P49662 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.54□□□□□ -1.52
CASP4P49662 SMC4P1-201ENST00000414479 527 ntBASIC5.54□□□□□ -1.52
CASP4P49662 PCNPP4-201ENST00000414817 517 ntBASIC5.54□□□□□ -1.52
CASP4P49662 COX6CP13-201ENST00000428703 226 ntBASIC5.54□□□□□ -1.52
CASP4P49662 RHOT1P3-201ENST00000436571 331 ntBASIC5.54□□□□□ -1.52
CASP4P49662 SNRPCP2-201ENST00000504370 475 ntBASIC5.54□□□□□ -1.52
CASP4P49662 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.54□□□□□ -1.52
CASP4P49662 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CASP4P49662 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.54□□□□□ -1.52
CASP4P49662 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.54□□□□□ -1.52
CASP4P49662 AC018695.5-201ENST00000605872 315 ntBASIC5.54□□□□□ -1.52
CASP4P49662 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CASP4P49662 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CASP4P49662 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CASP4P49662 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.54□□□□□ -1.52
CASP4P49662 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
CASP4P49662 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
CASP4P49662 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CASP4P49662 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CASP4P49662 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.53□□□□□ -1.52
CASP4P49662 AP000473.2-201ENST00000602659 1537 ntBASIC5.53□□□□□ -1.52
CASP4P49662 AC112198.2-201ENST00000426589 6996 ntBASIC5.53□□□□□ -1.52
CASP4P49662 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CASP4P49662 AC109780.1-201ENST00000451768 1344 ntBASIC5.53□□□□□ -1.52
CASP4P49662 AL353625.1-202ENST00000366273 571 ntBASIC5.53□□□□□ -1.52
CASP4P49662 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CASP4P49662 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CASP4P49662 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CASP4P49662 SNORA77-201ENST00000408716 125 ntBASIC5.53□□□□□ -1.52
CASP4P49662 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.53□□□□□ -1.52
CASP4P49662 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.53□□□□□ -1.52
CASP4P49662 AC091180.1-201ENST00000462104 372 ntBASIC5.53□□□□□ -1.52
CASP4P49662 AC074386.1-201ENST00000476560 767 ntBASIC5.53□□□□□ -1.52
CASP4P49662 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.53□□□□□ -1.52
CASP4P49662 AC006499.3-201ENST00000506077 748 ntBASIC5.53□□□□□ -1.52
CASP4P49662 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.53□□□□□ -1.52
CASP4P49662 SCARNA21.2-201ENST00000516600 166 ntBASIC5.53□□□□□ -1.52
CASP4P49662 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.53□□□□□ -1.52
CASP4P49662 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.53□□□□□ -1.52
CASP4P49662 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.53□□□□□ -1.52
CASP4P49662 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.53□□□□□ -1.52
CASP4P49662 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.53□□□□□ -1.52
CASP4P49662 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.53□□□□□ -1.52
CASP4P49662 TAS2R6P-201ENST00000605022 826 ntBASIC5.53□□□□□ -1.52
CASP4P49662 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.53□□□□□ -1.52
CASP4P49662 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CASP4P49662 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CASP4P49662 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CASP4P49662 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.53□□□□□ -1.52
CASP4P49662 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CASP4P49662 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CASP4P49662 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.53□□□□□ -1.52
CASP4P49662 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CASP4P49662 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CASP4P49662 AP005435.3-201ENST00000531260 3198 ntBASIC5.53□□□□□ -1.52
CASP4P49662 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms