Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.87□□□□□ -1.63
RFC3P40938 AP006245.2-201ENST00000522004 300 ntBASIC4.87□□□□□ -1.63
RFC3P40938 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.87□□□□□ -1.63
RFC3P40938 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.87□□□□□ -1.63
RFC3P40938 AL390726.5-202ENST00000564800 256 ntBASIC4.87□□□□□ -1.63
RFC3P40938 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.87□□□□□ -1.63
RFC3P40938 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.87□□□□□ -1.63
RFC3P40938 BNIP3P32-201ENST00000600015 554 ntBASIC4.87□□□□□ -1.63
RFC3P40938 AC087763.1-201ENST00000603391 286 ntBASIC4.87□□□□□ -1.63
RFC3P40938 MIR6133-201ENST00000617057 108 ntBASIC4.87□□□□□ -1.63
RFC3P40938 AF117829.2-201ENST00000619538 361 ntBASIC4.87□□□□□ -1.63
RFC3P40938 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RFC3P40938 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.87□□□□□ -1.63
RFC3P40938 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFC3P40938 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RFC3P40938 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RFC3P40938 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFC3P40938 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.87□□□□□ -1.63
RFC3P40938 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFC3P40938 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.86□□□□□ -1.63
RFC3P40938 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFC3P40938 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFC3P40938 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFC3P40938 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RFC3P40938 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFC3P40938 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.86□□□□□ -1.63
RFC3P40938 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFC3P40938 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.86□□□□□ -1.63
RFC3P40938 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.86□□□□□ -1.63
RFC3P40938 AC003973.3-201ENST00000624863 2822 ntBASIC4.86□□□□□ -1.63
RFC3P40938 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFC3P40938 RNU6-249P-201ENST00000363016 102 ntBASIC4.86□□□□□ -1.63
RFC3P40938 RNA5SP487-201ENST00000410186 122 ntBASIC4.86□□□□□ -1.63
RFC3P40938 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.86□□□□□ -1.63
RFC3P40938 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.86□□□□□ -1.63
RFC3P40938 GAPDHP25-201ENST00000447061 1001 ntBASIC4.86□□□□□ -1.63
RFC3P40938 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.86□□□□□ -1.63
RFC3P40938 AL389915.2-201ENST00000454576 441 ntBASIC4.86□□□□□ -1.63
RFC3P40938 ABCC13-202ENST00000463099 3842 ntBASIC4.86□□□□□ -1.63
RFC3P40938 CBX1P5-201ENST00000475330 559 ntBASIC4.86□□□□□ -1.63
RFC3P40938 AC058823.1-201ENST00000485315 474 ntBASIC4.86□□□□□ -1.63
RFC3P40938 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.86□□□□□ -1.63
RFC3P40938 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.86□□□□□ -1.63
RFC3P40938 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.86□□□□□ -1.63
RFC3P40938 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.86□□□□□ -1.63
RFC3P40938 RNA5SP373-201ENST00000517271 95 ntBASIC4.86□□□□□ -1.63
RFC3P40938 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.86□□□□□ -1.63
RFC3P40938 OR4A46P-201ENST00000527255 933 ntBASIC4.86□□□□□ -1.63
RFC3P40938 AC022832.1-201ENST00000530718 645 ntBASIC4.86□□□□□ -1.63
RFC3P40938 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.86□□□□□ -1.63
RFC3P40938 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.86□□□□□ -1.63
RFC3P40938 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.86□□□□□ -1.63
RFC3P40938 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.86□□□□□ -1.63
RFC3P40938 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.86□□□□□ -1.63
RFC3P40938 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.86□□□□□ -1.63
RFC3P40938 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.86□□□□□ -1.63
RFC3P40938 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
RFC3P40938 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RFC3P40938 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.86□□□□□ -1.63
RFC3P40938 AC053481.2-202ENST00000582394 1500 ntBASIC4.86□□□□□ -1.63
RFC3P40938 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
RFC3P40938 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RFC3P40938 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.86□□□□□ -1.63
RFC3P40938 AC133552.1-201ENST00000569988 4007 ntBASIC4.86□□□□□ -1.63
RFC3P40938 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RFC3P40938 AC021242.1-201ENST00000507315 2035 ntBASIC4.85□□□□□ -1.63
RFC3P40938 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFC3P40938 AC083843.2-201ENST00000568248 6253 ntBASIC4.85□□□□□ -1.63
RFC3P40938 AC114947.2-201ENST00000565748 2125 ntBASIC4.85□□□□□ -1.63
RFC3P40938 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.85□□□□□ -1.63
RFC3P40938 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RFC3P40938 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFC3P40938 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFC3P40938 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFC3P40938 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.85□□□□□ -1.63
RFC3P40938 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RFC3P40938 SNORA70.6-201ENST00000383934 134 ntBASIC4.85□□□□□ -1.63
RFC3P40938 U3.28-201ENST00000391249 210 ntBASIC4.85□□□□□ -1.63
RFC3P40938 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.85□□□□□ -1.63
RFC3P40938 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.85□□□□□ -1.63
RFC3P40938 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.85□□□□□ -1.63
RFC3P40938 RPS27P18-201ENST00000431701 247 ntBASIC4.85□□□□□ -1.63
RFC3P40938 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.85□□□□□ -1.63
RFC3P40938 RPS23P9-201ENST00000448848 438 ntBASIC4.85□□□□□ -1.63
RFC3P40938 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.85□□□□□ -1.63
RFC3P40938 RN7SL329P-201ENST00000467740 299 ntBASIC4.85□□□□□ -1.63
RFC3P40938 AC091544.1-201ENST00000484702 348 ntBASIC4.85□□□□□ -1.63
RFC3P40938 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
RFC3P40938 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.85□□□□□ -1.63
RFC3P40938 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.85□□□□□ -1.63
RFC3P40938 AC110775.1-201ENST00000513721 462 ntBASIC4.85□□□□□ -1.63
RFC3P40938 YWHABP2-201ENST00000540201 713 ntBASIC4.85□□□□□ -1.63
RFC3P40938 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.85□□□□□ -1.63
RFC3P40938 AC084824.2-201ENST00000548906 345 ntBASIC4.85□□□□□ -1.63
RFC3P40938 OR11H3P-201ENST00000554547 982 ntBASIC4.85□□□□□ -1.63
RFC3P40938 RN7SL708P-201ENST00000580952 299 ntBASIC4.85□□□□□ -1.63
RFC3P40938 AC233702.9-201ENST00000581528 203 ntBASIC4.85□□□□□ -1.63
RFC3P40938 AC006116.3-201ENST00000592968 361 ntBASIC4.85□□□□□ -1.63
RFC3P40938 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.85□□□□□ -1.63
RFC3P40938 TAS2R6P-201ENST00000605022 826 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms