Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC079600.1-201ENST00000550326 297 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.12□□□□□ -1.59
PDLIM1O00151 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.12□□□□□ -1.59
PDLIM1O00151 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM1O00151 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM1O00151 AP000919.1-201ENST00000582850 985 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM1O00151 MIR8069-1-201ENST00000616627 86 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 SNORA11.6-201ENST00000619030 128 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 AL023881.1-201ENST00000621088 301 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 MIR8069-2-201ENST00000621412 86 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 AC106872.5-201ENST00000508856 1416 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PDLIM1O00151 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.12□□□□□ -1.59
PDLIM1O00151 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
PDLIM1O00151 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
PDLIM1O00151 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PDLIM1O00151 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM1O00151 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM1O00151 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM1O00151 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PDLIM1O00151 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PDLIM1O00151 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM1O00151 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
PDLIM1O00151 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM1O00151 IL6STP1-201ENST00000346911 1020 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM1O00151 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM1O00151 SNORA68.2-201ENST00000391263 128 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 EEF1B2P8-201ENST00000414101 671 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 PCNPP4-201ENST00000414817 517 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 Z93019.1-201ENST00000416450 973 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM1O00151 EIF4A1P1-201ENST00000420241 934 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 PTP4A1P1-201ENST00000420539 515 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 AC093155.2-201ENST00000420734 937 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 AC017019.1-201ENST00000426129 261 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 AC127526.2-201ENST00000426436 775 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM1O00151 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM1O00151 ARAFP2-201ENST00000440565 559 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.11□□□□□ -1.59
PDLIM1O00151 MTCYBP14-201ENST00000457471 715 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM1O00151 RPL23AP37-201ENST00000479658 549 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.11□□□□□ -1.59
PDLIM1O00151 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM1O00151 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.11□□□□□ -1.59
PDLIM1O00151 OR8G3P-201ENST00000533406 921 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.11□□□□□ -1.59
PDLIM1O00151 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.11□□□□□ -1.59
PDLIM1O00151 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM1O00151 MIR4311-201ENST00000580794 100 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 MIR3614-201ENST00000581261 86 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 MIR4260-201ENST00000583107 67 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM1O00151 RNF138P2-201ENST00000603490 592 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 FAM27E4-201ENST00000605259 342 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 AC243960.7-201ENST00000623532 707 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.11□□□□□ -1.59
PDLIM1O00151 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM1O00151 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM1O00151 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
PDLIM1O00151 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM1O00151 MTND5P23-201ENST00000430812 1655 ntBASIC5.11□□□□□ -1.59
PDLIM1O00151 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM1O00151 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM1O00151 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PDLIM1O00151 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM1O00151 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM1O00151 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM1O00151 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM1O00151 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM1O00151 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM1O00151 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PDLIM1O00151 AL031985.1-201ENST00000392713 418 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM1O00151 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PDLIM1O00151 NEPNP-201ENST00000404786 1371 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 AL009179.1-201ENST00000406085 265 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 AC009237.10-201ENST00000414112 510 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM1O00151 OR2X1P-201ENST00000421144 687 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM1O00151 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM1O00151 AC239798.3-201ENST00000454459 408 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 AC245100.2-201ENST00000454544 1679 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM1O00151 AP000797.2-201ENST00000475768 606 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM1O00151 RN7SL214P-201ENST00000487317 265 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 RN7SL447P-201ENST00000494711 245 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms