Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SNORA70.11-201ENST00000515987 138 ntBASIC5.47□□□□□ -1.53
SIX2Q9NPC8 SNORA70.13-201ENST00000516116 138 ntBASIC5.47□□□□□ -1.53
SIX2Q9NPC8 AC105031.1-201ENST00000518550 476 ntBASIC5.47□□□□□ -1.53
SIX2Q9NPC8 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.47□□□□□ -1.53
SIX2Q9NPC8 AC011840.5-201ENST00000582125 771 ntBASIC5.47□□□□□ -1.53
SIX2Q9NPC8 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.47□□□□□ -1.53
SIX2Q9NPC8 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.47□□□□□ -1.53
SIX2Q9NPC8 AC011445.2-201ENST00000599274 173 ntBASIC5.47□□□□□ -1.53
SIX2Q9NPC8 AC005229.3-201ENST00000603438 323 ntBASIC5.47□□□□□ -1.53
SIX2Q9NPC8 AC095055.1-201ENST00000603472 1113 ntBASIC5.47□□□□□ -1.53
SIX2Q9NPC8 BX322635.1-201ENST00000605804 496 ntBASIC5.47□□□□□ -1.53
SIX2Q9NPC8 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.47□□□□□ -1.53
SIX2Q9NPC8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIX2Q9NPC8 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.47□□□□□ -1.53
SIX2Q9NPC8 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.47□□□□□ -1.53
SIX2Q9NPC8 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SIX2Q9NPC8 AL731532.2-201ENST00000623542 1953 ntBASIC5.47□□□□□ -1.53
SIX2Q9NPC8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIX2Q9NPC8 AC063976.2-201ENST00000425667 3556 ntBASIC5.47□□□□□ -1.53
SIX2Q9NPC8 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SIX2Q9NPC8 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SIX2Q9NPC8 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SIX2Q9NPC8 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIX2Q9NPC8 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SIX2Q9NPC8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
SIX2Q9NPC8 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SIX2Q9NPC8 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.46□□□□□ -1.53
SIX2Q9NPC8 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SIX2Q9NPC8 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.46□□□□□ -1.53
SIX2Q9NPC8 AP001157.1-201ENST00000550837 2339 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 RNU4-23P-201ENST00000362839 140 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 SNORA17.1-201ENST00000362945 126 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AL391361.1-201ENST00000405580 489 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AC007738.1-201ENST00000413892 348 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 MTND2P11-201ENST00000423638 648 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 RPL35AP21-201ENST00000437667 333 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 TXNP5-201ENST00000441043 315 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 MRPL35P2-201ENST00000448009 511 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 MTND3P4-201ENST00000453537 303 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AC091180.1-201ENST00000462104 372 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 BX284632.1-201ENST00000478218 541 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 ATP5LP3-201ENST00000514223 304 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AC012339.2-201ENST00000523996 453 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 NDUFB4P11-201ENST00000560510 395 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AGGF1P9-201ENST00000561884 913 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AC023389.2-201ENST00000580031 955 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AL023583.1-201ENST00000607518 1143 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AL109620.1-201ENST00000618738 1197 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AC015660.5-201ENST00000623238 564 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AP002505.2-201ENST00000623585 696 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 THAP12P5-201ENST00000405864 2275 ntBASIC5.46□□□□□ -1.54
SIX2Q9NPC8 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
SIX2Q9NPC8 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.45□□□□□ -1.54
SIX2Q9NPC8 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SIX2Q9NPC8 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SIX2Q9NPC8 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SIX2Q9NPC8 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.45□□□□□ -1.54
SIX2Q9NPC8 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.45□□□□□ -1.54
SIX2Q9NPC8 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SIX2Q9NPC8 U3.23-201ENST00000391132 200 ntBASIC5.45□□□□□ -1.54
SIX2Q9NPC8 ATP5HP3-201ENST00000396994 486 ntBASIC5.45□□□□□ -1.54
SIX2Q9NPC8 RN7SKP206-201ENST00000410823 293 ntBASIC5.45□□□□□ -1.54
SIX2Q9NPC8 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SIX2Q9NPC8 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SIX2Q9NPC8 TRGV7-201ENST00000427089 353 ntBASIC5.45□□□□□ -1.54
SIX2Q9NPC8 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.45□□□□□ -1.54
SIX2Q9NPC8 RPS29P9-201ENST00000440360 171 ntBASIC5.45□□□□□ -1.54
SIX2Q9NPC8 XKRYP6-201ENST00000440468 1116 ntBASIC5.45□□□□□ -1.54
SIX2Q9NPC8 XKRYP3-201ENST00000442113 1116 ntBASIC5.45□□□□□ -1.54
SIX2Q9NPC8 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.45□□□□□ -1.54
SIX2Q9NPC8 AL691482.1-201ENST00000453255 87 ntBASIC5.45□□□□□ -1.54
SIX2Q9NPC8 HMGB1P4-201ENST00000455362 567 ntBASIC5.45□□□□□ -1.54
SIX2Q9NPC8 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.45□□□□□ -1.54
SIX2Q9NPC8 COX6B1P2-201ENST00000489624 230 ntBASIC5.45□□□□□ -1.54
SIX2Q9NPC8 AC073073.1-201ENST00000493920 463 ntBASIC5.45□□□□□ -1.54
SIX2Q9NPC8 MORF4L2P1-201ENST00000503761 858 ntBASIC5.45□□□□□ -1.54
SIX2Q9NPC8 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.45□□□□□ -1.54
SIX2Q9NPC8 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms