Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 DCAF13P2-201ENST00000514188 555 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 RNU6-507P-201ENST00000516045 100 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 SNORA81.2-201ENST00000516868 170 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 IGLC4-201ENST00000517690 248 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 OR4K7P-201ENST00000580232 945 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC233702.7-202ENST00000582941 211 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 BOLA2P1-201ENST00000584794 232 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC112220.3-201ENST00000605502 502 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC092954.2-201ENST00000609103 430 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC004948.1-201ENST00000609858 672 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 U1.25-201ENST00000614085 162 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 RN7SL820P-201ENST00000616437 299 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC243830.3-201ENST00000616810 376 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 U1.34-201ENST00000618578 162 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 U1.31-201ENST00000620022 160 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC093909.6-201ENST00000624757 775 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC007159.1-201ENST00000566529 4706 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSU72Q9NP77 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSU72Q9NP77 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSU72Q9NP77 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSU72Q9NP77 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSU72Q9NP77 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSU72Q9NP77 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSU72Q9NP77 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSU72Q9NP77 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSU72Q9NP77 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSU72Q9NP77 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSU72Q9NP77 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSU72Q9NP77 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 OR10D1P-201ENST00000355343 936 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 Y_RNA.18-201ENST00000362461 102 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 Y_RNA.61-201ENST00000362835 102 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 SNORD65.1-201ENST00000390889 71 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSU72Q9NP77 RPL23AP39-201ENST00000415533 405 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 MRPS36P1-201ENST00000421291 307 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 MTND1P14-201ENST00000427400 950 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 AC000111.3-201ENST00000433478 193 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 MTND3P21-201ENST00000433774 331 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 B3GNT2P1-201ENST00000434960 952 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 YWHAZP2-201ENST00000440317 728 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 RPL23AP28-201ENST00000448062 470 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 OR7E102P-201ENST00000448855 1015 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 DNAJC19P1-201ENST00000455312 319 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 RN7SL308P-201ENST00000464971 297 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 RN7SL815P-201ENST00000470970 290 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 ACTG1P13-201ENST00000486987 1043 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 RPL34P29-201ENST00000491411 325 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 ATP1B1P1-201ENST00000509767 915 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSU72Q9NP77 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 FGF7P1-201ENST00000582820 288 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 RN7SL664P-201ENST00000584239 305 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.59□□□□□ -1.35
SSU72Q9NP77 AC012065.4-201ENST00000602445 679 ntBASIC6.59□□□□□ -1.35
SSU72Q9NP77 COX6CP16-201ENST00000603667 216 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms