Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 STX3-208ENST00000641815 3236 ntBASIC5.42□□□□□ -1.54
TRIM4Q9C037 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM4Q9C037 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.42□□□□□ -1.54
TRIM4Q9C037 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 AC063923.1-201ENST00000478982 1619 ntBASIC5.41□□□□□ -1.54
TRIM4Q9C037 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM4Q9C037 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM4Q9C037 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM4Q9C037 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TRIM4Q9C037 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM4Q9C037 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM4Q9C037 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM4Q9C037 BMS1P3-201ENST00000372011 932 ntBASIC5.41□□□□□ -1.54
TRIM4Q9C037 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM4Q9C037 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM4Q9C037 MIR130A-201ENST00000385274 89 ntBASIC5.41□□□□□ -1.54
TRIM4Q9C037 AL589647.1-201ENST00000402485 466 ntBASIC5.41□□□□□ -1.54
TRIM4Q9C037 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.41□□□□□ -1.54
TRIM4Q9C037 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM4Q9C037 MRPL53P1-201ENST00000414323 319 ntBASIC5.41□□□□□ -1.54
TRIM4Q9C037 AK4P4-201ENST00000419465 646 ntBASIC5.41□□□□□ -1.54
TRIM4Q9C037 TMX2P1-201ENST00000436507 708 ntBASIC5.41□□□□□ -1.54
TRIM4Q9C037 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM4Q9C037 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM4Q9C037 AC079841.1-201ENST00000481228 950 ntBASIC5.41□□□□□ -1.54
TRIM4Q9C037 AC024558.1-201ENST00000505008 528 ntBASIC5.41□□□□□ -1.54
TRIM4Q9C037 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM4Q9C037 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM4Q9C037 HMGB1P19-201ENST00000517578 577 ntBASIC5.41□□□□□ -1.54
TRIM4Q9C037 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM4Q9C037 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM4Q9C037 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM4Q9C037 MIR6837-201ENST00000620884 64 ntBASIC5.41□□□□□ -1.54
TRIM4Q9C037 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.41□□□□□ -1.54
TRIM4Q9C037 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
TRIM4Q9C037 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM4Q9C037 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM4Q9C037 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM4Q9C037 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM4Q9C037 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM4Q9C037 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM4Q9C037 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM4Q9C037 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM4Q9C037 MIR23A-201ENST00000385245 73 ntBASIC5.4□□□□□ -1.54
TRIM4Q9C037 AL359643.1-201ENST00000404109 423 ntBASIC5.4□□□□□ -1.54
TRIM4Q9C037 RPL26P29-201ENST00000415623 438 ntBASIC5.4□□□□□ -1.54
TRIM4Q9C037 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.4□□□□□ -1.54
TRIM4Q9C037 AC009963.2-201ENST00000453431 138 ntBASIC5.4□□□□□ -1.54
TRIM4Q9C037 AC021660.1-201ENST00000465006 554 ntBASIC5.4□□□□□ -1.54
TRIM4Q9C037 RPL7P39-201ENST00000481157 744 ntBASIC5.4□□□□□ -1.54
TRIM4Q9C037 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 RPS7P6-201ENST00000485777 579 ntBASIC5.4□□□□□ -1.54
TRIM4Q9C037 AC073610.1-201ENST00000489971 396 ntBASIC5.4□□□□□ -1.54
TRIM4Q9C037 DUTP1-201ENST00000493631 470 ntBASIC5.4□□□□□ -1.54
TRIM4Q9C037 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM4Q9C037 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 AC137627.1-201ENST00000545761 289 ntBASIC5.4□□□□□ -1.54
TRIM4Q9C037 AC139697.1-201ENST00000548429 745 ntBASIC5.4□□□□□ -1.54
TRIM4Q9C037 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM4Q9C037 NANOGP3-201ENST00000605855 286 ntBASIC5.4□□□□□ -1.54
TRIM4Q9C037 MIR8080-201ENST00000622224 89 ntBASIC5.4□□□□□ -1.54
TRIM4Q9C037 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.4□□□□□ -1.55
TRIM4Q9C037 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM4Q9C037 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM4Q9C037 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM4Q9C037 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.4□□□□□ -1.55
TRIM4Q9C037 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM4Q9C037 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 AL034370.1-201ENST00000397254 1590 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 RPL23P2-201ENST00000320371 421 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 RNA5SP326-201ENST00000363209 110 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 U3.28-201ENST00000391249 210 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 AC009804.1-201ENST00000400949 179 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 AL078599.1-201ENST00000402075 293 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 MIR1271-201ENST00000408537 86 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 FAR2P2-201ENST00000413041 594 ntBASIC5.39□□□□□ -1.55
TRIM4Q9C037 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM4Q9C037 RNGTTP1-201ENST00000420965 728 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms