Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC044810.1-201ENST00000480271 711 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 OR11I1P-201ENST00000486033 954 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC015524.1-201ENST00000491585 472 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 EIF4E2P2-201ENST00000492033 736 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 ARL4AP2-201ENST00000507378 601 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 NACAP5-201ENST00000509863 636 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 RNA5SP116-201ENST00000516132 98 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 snoZ278.1-201ENST00000517059 112 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 OR9G2P-201ENST00000533326 880 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC074029.1-201ENST00000552531 1044 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC005519.1-201ENST00000554490 601 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 SNORA70D-201ENST00000578836 135 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 MIR5708-201ENST00000579723 85 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC009704.2-201ENST00000618739 483 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 OR5H6-203ENST00000642105 978 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC110597.1-201ENST00000562669 3176 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC022507.1-201ENST00000548349 1505 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC217777.1-201ENST00000570034 1471 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 FANCD2P2-201ENST00000437591 1400 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 Z97989.1-201ENST00000531702 2421 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AL359694.2-201ENST00000567753 1615 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 BRD7P1-201ENST00000557705 1915 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 RPL12P13-201ENST00000310055 497 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 RNU6-500P-201ENST00000362349 107 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 RNU6-181P-201ENST00000363225 107 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 SNORA38B-201ENST00000363524 131 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 RNU6-549P-201ENST00000384433 107 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AL359694.1-201ENST00000403247 604 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AL079342.2-201ENST00000403367 482 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AL590635.1-201ENST00000406314 586 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 RN7SKP146-201ENST00000410242 334 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 USP9YP6-201ENST00000413550 854 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 VTA1P1-201ENST00000414044 866 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 RPS7P12-201ENST00000422385 582 ntBASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.57□□□□□ -1.52
SSBP3Q9BWW4 RPL26P30-201ENST00000453533 435 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms