Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 AC073575.2-201ENST00000614212 627 ntBASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 FRG1EP-201ENST00000634469 770 ntBASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 AC004817.4-201ENST00000602396 3625 ntBASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 TRIM51GP-201ENST00000534741 1350 ntBASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 AL022322.2-201ENST00000624072 20397 ntBASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 Z95331.1-201ENST00000623075 23112 ntBASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 RPL21P67-201ENST00000402896 478 ntBASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 AC010740.1-201ENST00000417035 684 ntBASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 ATP5LP3-201ENST00000514223 304 ntBASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 AC100784.1-201ENST00000522790 310 ntBASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 MIR4660-201ENST00000583549 74 ntBASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 IMMP1LP3-201ENST00000604197 224 ntBASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 AP005131.7-201ENST00000610087 611 ntBASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 AC090527.3-201ENST00000619041 548 ntBASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 AC015660.5-201ENST00000623238 564 ntBASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 SCARNA15-201ENST00000607520 4325 ntBASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC65Q8IXS2 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 OR9K1P-201ENST00000326513 941 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 MIR600-201ENST00000385007 98 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 NUDT19P3-201ENST00000404698 555 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 SLC35E1P1-201ENST00000419313 864 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 RPS4XP16-201ENST00000427198 791 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 AC009238.2-201ENST00000431026 355 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 RPS4XP1-201ENST00000482189 787 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 RPS21P4-201ENST00000487122 248 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 RN7SL591P-201ENST00000496150 292 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 OR8A2P-201ENST00000528631 952 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 AC127381.1-201ENST00000555979 939 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 MIR6768-201ENST00000610734 72 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 BNIP3P41-202ENST00000616656 861 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.76□□□□□ -1.49
CCDC65Q8IXS2 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AC092376.2-201ENST00000622621 4116 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms