Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 MAPK10-338ENST00000641647 3362 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP41Q3LFD5 RNA5SP305-201ENST00000362665 119 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AL133270.1-201ENST00000402635 279 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 RPSAP35-201ENST00000413753 818 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 RIMKLBP2-201ENST00000424737 654 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC017019.1-201ENST00000426129 261 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 HMGN2P27-201ENST00000427352 270 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 MTND4LP7-201ENST00000431728 294 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 RPL12P3-201ENST00000440080 396 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AL691517.1-201ENST00000440833 1235 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 RPS15AP29-201ENST00000445539 400 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 RN7SL97P-201ENST00000486780 299 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC109462.1-201ENST00000491087 368 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC015864.1-201ENST00000496512 544 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC105420.1-201ENST00000504389 582 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 GOLGA5P1-201ENST00000507317 980 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC122688.1-201ENST00000541494 223 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 OR11J2P-201ENST00000555298 907 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC027216.1-201ENST00000577726 685 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC095055.1-201ENST00000603472 1113 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 TAS2R6P-201ENST00000605022 826 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC024940.4-201ENST00000605507 246 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC006213.4-201ENST00000616184 634 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP41Q3LFD5 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 NAMPTP1-201ENST00000440465 2514 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC093909.5-201ENST00000621839 1799 ntBASIC5.78□□□□□ -1.48
USP41Q3LFD5 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.78□□□□□ -1.48
USP41Q3LFD5 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.48
USP41Q3LFD5 AC087565.3-202ENST00000642085 1603 ntBASIC5.77□□□□□ -1.48
USP41Q3LFD5 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP41Q3LFD5 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.77□□□□□ -1.49
USP41Q3LFD5 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP41Q3LFD5 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.77□□□□□ -1.49
USP41Q3LFD5 AL360270.2-201ENST00000562952 5985 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP41Q3LFD5 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP41Q3LFD5 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
USP41Q3LFD5 AP005435.3-201ENST00000531260 3198 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.77□□□□□ -1.49
USP41Q3LFD5 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP41Q3LFD5 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.77□□□□□ -1.49
USP41Q3LFD5 AL645733.1-201ENST00000402250 217 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 CBX1P3-201ENST00000413296 527 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.77□□□□□ -1.49
USP41Q3LFD5 OR10T1P-201ENST00000424327 947 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 MRPS33P4-201ENST00000434892 317 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 IGBP1P3-201ENST00000447449 1000 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.77□□□□□ -1.49
USP41Q3LFD5 SNORD125-201ENST00000459538 96 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.77□□□□□ -1.49
USP41Q3LFD5 COX6B1P2-201ENST00000489624 230 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 OR4A43P-201ENST00000532938 908 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.77□□□□□ -1.49
USP41Q3LFD5 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.77□□□□□ -1.49
USP41Q3LFD5 AC006116.3-201ENST00000592968 361 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP41Q3LFD5 AC090527.3-201ENST00000619041 548 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 AC005618.4-201ENST00000625053 554 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP41Q3LFD5 HSPA8P18-201ENST00000439846 1928 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 TCP11X1-202ENST00000622971 1372 ntBASIC5.77□□□□□ -1.49
USP41Q3LFD5 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP41Q3LFD5 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP41Q3LFD5 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USP41Q3LFD5 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
USP41Q3LFD5 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USP41Q3LFD5 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP41Q3LFD5 BCORP1-203ENST00000513194 5093 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms