Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK3Q00526 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK3Q00526 AC114774.1-201ENST00000507410 1770 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK3Q00526 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK3Q00526 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDK3Q00526 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK3Q00526 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CDK3Q00526 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK3Q00526 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDK3Q00526 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK3Q00526 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CDK3Q00526 AC011493.1-201ENST00000596753 1632 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 AC007938.2-201ENST00000604666 2634 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK3Q00526 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK3Q00526 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CDK3Q00526 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK3Q00526 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK3Q00526 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK3Q00526 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CDK3Q00526 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK3Q00526 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK3Q00526 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK3Q00526 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK3Q00526 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK3Q00526 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.3□□□□□ -1.56
CDK3Q00526 RPL10P10-201ENST00000403509 664 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 PPIAP9-201ENST00000403866 498 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 RNU4-34P-201ENST00000410431 124 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.3□□□□□ -1.56
CDK3Q00526 AL390879.2-203ENST00000426943 1121 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.3□□□□□ -1.56
CDK3Q00526 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK3Q00526 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK3Q00526 AL590399.4-201ENST00000436561 601 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK3Q00526 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK3Q00526 RN7SL222P-201ENST00000476452 299 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK3Q00526 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.3□□□□□ -1.56
CDK3Q00526 AC090058.1-201ENST00000498788 435 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK3Q00526 SCARNA20.4-201ENST00000516969 131 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 AC027308.1-201ENST00000517993 110 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 YWHABP2-201ENST00000540201 713 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK3Q00526 AP000619.2-201ENST00000546014 969 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK3Q00526 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK3Q00526 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK3Q00526 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK3Q00526 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.3□□□□□ -1.56
CDK3Q00526 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK3Q00526 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK3Q00526 uc_338.7-201ENST00000621834 124 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 AP002505.2-201ENST00000623585 696 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 AC079298.2-201ENST00000623885 459 ntBASIC5.3□□□□□ -1.56
CDK3Q00526 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK3Q00526 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK3Q00526 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.3□□□□□ -1.56
CDK3Q00526 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK3Q00526 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CDK3Q00526 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK3Q00526 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK3Q00526 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.3□□□□□ -1.56
CDK3Q00526 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK3Q00526 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDK3Q00526 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDK3Q00526 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDK3Q00526 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDK3Q00526 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.29□□□□□ -1.56
CDK3Q00526 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDK3Q00526 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK3Q00526 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDK3Q00526 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDK3Q00526 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDK3Q00526 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDK3Q00526 RN7SKP185-201ENST00000362813 326 ntBASIC5.29□□□□□ -1.56
CDK3Q00526 RN7SKP186-201ENST00000365371 303 ntBASIC5.29□□□□□ -1.56
CDK3Q00526 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CDK3Q00526 SNORA40.4-201ENST00000390971 128 ntBASIC5.29□□□□□ -1.56
CDK3Q00526 HSPA8P15-201ENST00000401676 786 ntBASIC5.29□□□□□ -1.56
CDK3Q00526 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK3Q00526 SETP9-201ENST00000423837 832 ntBASIC5.29□□□□□ -1.56
CDK3Q00526 MRPS21P2-201ENST00000424704 264 ntBASIC5.29□□□□□ -1.56
CDK3Q00526 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK3Q00526 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK3Q00526 AL590762.3-201ENST00000436372 640 ntBASIC5.29□□□□□ -1.56
CDK3Q00526 AURKAPS1-201ENST00000451805 1212 ntBASIC5.29□□□□□ -1.56
CDK3Q00526 AC104634.1-201ENST00000452720 462 ntBASIC5.29□□□□□ -1.56
CDK3Q00526 AC005532.2-201ENST00000467154 373 ntBASIC5.29□□□□□ -1.56
CDK3Q00526 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.29□□□□□ -1.56
CDK3Q00526 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK3Q00526 RN7SL423P-201ENST00000486202 304 ntBASIC5.29□□□□□ -1.56
CDK3Q00526 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK3Q00526 AC015864.1-201ENST00000496512 544 ntBASIC5.29□□□□□ -1.56
CDK3Q00526 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK3Q00526 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK3Q00526 AC093763.2-201ENST00000505334 1223 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms