Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC027176.2-201ENST00000559166 746 ntBASIC5.03□□□□□ -1.6
CDH11P55287 NMNAT1P5-201ENST00000559657 841 ntBASIC5.03□□□□□ -1.6
CDH11P55287 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH11P55287 RN7SL290P-201ENST00000578661 300 ntBASIC5.03□□□□□ -1.6
CDH11P55287 MIR4660-201ENST00000583549 74 ntBASIC5.03□□□□□ -1.6
CDH11P55287 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH11P55287 AC098483.2-201ENST00000603158 454 ntBASIC5.03□□□□□ -1.6
CDH11P55287 AC012213.4-201ENST00000606457 354 ntBASIC5.03□□□□□ -1.6
CDH11P55287 RN7SL544P-201ENST00000617232 284 ntBASIC5.03□□□□□ -1.6
CDH11P55287 RN7SL763P-201ENST00000620922 284 ntBASIC5.03□□□□□ -1.6
CDH11P55287 AP006248.3-201ENST00000623580 594 ntBASIC5.03□□□□□ -1.6
CDH11P55287 AL691477.1-201ENST00000624398 162 ntBASIC5.03□□□□□ -1.6
CDH11P55287 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH11P55287 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH11P55287 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CDH11P55287 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH11P55287 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH11P55287 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDH11P55287 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH11P55287 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH11P55287 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
CDH11P55287 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH11P55287 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH11P55287 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH11P55287 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH11P55287 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH11P55287 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH11P55287 RNA5SP46-201ENST00000362370 120 ntBASIC5.02□□□□□ -1.61
CDH11P55287 RNA5SP394-201ENST00000364216 119 ntBASIC5.02□□□□□ -1.61
CDH11P55287 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH11P55287 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH11P55287 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH11P55287 CBX1P3-201ENST00000413296 527 ntBASIC5.02□□□□□ -1.61
CDH11P55287 AL121878.1-201ENST00000418638 859 ntBASIC5.02□□□□□ -1.61
CDH11P55287 AC073508.1-201ENST00000428866 656 ntBASIC5.02□□□□□ -1.61
CDH11P55287 AL022331.1-201ENST00000429025 477 ntBASIC5.02□□□□□ -1.61
CDH11P55287 AC023141.6-201ENST00000429418 337 ntBASIC5.02□□□□□ -1.61
CDH11P55287 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH11P55287 AC002504.1-201ENST00000438281 691 ntBASIC5.02□□□□□ -1.61
CDH11P55287 AP000281.1-201ENST00000444036 316 ntBASIC5.02□□□□□ -1.61
CDH11P55287 EEF1B2P6-201ENST00000445713 673 ntBASIC5.02□□□□□ -1.61
CDH11P55287 AZGP1P2-201ENST00000454506 345 ntBASIC5.02□□□□□ -1.61
CDH11P55287 RPS23P6-201ENST00000466136 431 ntBASIC5.02□□□□□ -1.61
CDH11P55287 RPL32P33-201ENST00000487023 394 ntBASIC5.02□□□□□ -1.61
CDH11P55287 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH11P55287 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH11P55287 RNU6-889P-201ENST00000517189 103 ntBASIC5.02□□□□□ -1.61
CDH11P55287 IGLV3-30-201ENST00000524362 298 ntBASIC5.02□□□□□ -1.61
CDH11P55287 AL121839.1-201ENST00000556233 1185 ntBASIC5.02□□□□□ -1.61
CDH11P55287 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
CDH11P55287 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH11P55287 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH11P55287 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH11P55287 MIR4311-201ENST00000580794 100 ntBASIC5.02□□□□□ -1.61
CDH11P55287 H3F3BP2-201ENST00000583907 357 ntBASIC5.02□□□□□ -1.61
CDH11P55287 FAM72A-208ENST00000607379 1139 ntBASIC5.02□□□□□ -1.61
CDH11P55287 AC024933.1-201ENST00000608472 348 ntBASIC5.02□□□□□ -1.61
CDH11P55287 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH11P55287 AL592494.3-201ENST00000609485 464 ntBASIC5.02□□□□□ -1.61
CDH11P55287 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH11P55287 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CDH11P55287 AL390318.1-201ENST00000624564 687 ntBASIC5.02□□□□□ -1.61
CDH11P55287 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH11P55287 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH11P55287 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH11P55287 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CDH11P55287 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH11P55287 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CDH11P55287 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH11P55287 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH11P55287 Z95331.1-201ENST00000623075 23112 ntBASIC5.02□□□□□ -1.61
CDH11P55287 PROS2P-201ENST00000474651 1951 ntBASIC5.02□□□□□ -1.61
CDH11P55287 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH11P55287 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH11P55287 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH11P55287 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH11P55287 AC092376.2-201ENST00000622621 4116 ntBASIC5.01□□□□□ -1.61
CDH11P55287 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH11P55287 AC008079.2-201ENST00000623543 20396 ntBASIC5.01□□□□□ -1.61
CDH11P55287 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CDH11P55287 AC007842.1-201ENST00000597336 2039 ntBASIC5.01□□□□□ -1.61
CDH11P55287 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH11P55287 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH11P55287 RNA5SP241-201ENST00000391326 114 ntBASIC5.01□□□□□ -1.61
CDH11P55287 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH11P55287 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.01□□□□□ -1.61
CDH11P55287 AC013410.2-201ENST00000422627 201 ntBASIC5.01□□□□□ -1.61
CDH11P55287 UBE2V1P6-201ENST00000430840 422 ntBASIC5.01□□□□□ -1.61
CDH11P55287 HMGB3P24-201ENST00000433260 622 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH11P55287 AL596266.1-201ENST00000448132 400 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AP000547.1-201ENST00000454360 617 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH11P55287 RPS27AP2-201ENST00000457576 465 ntBASIC5.01□□□□□ -1.61
CDH11P55287 STRADBP1-201ENST00000478954 1281 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.01□□□□□ -1.61
CDH11P55287 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH11P55287 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.01□□□□□ -1.61
CDH11P55287 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH11P55287 DUTP7-201ENST00000507982 486 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms