Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.58□□□□□ -1.52
CASP4P49662 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.58□□□□□ -1.52
CASP4P49662 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.58□□□□□ -1.52
CASP4P49662 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.58□□□□□ -1.52
CASP4P49662 AC114947.2-201ENST00000565748 2125 ntBASIC5.58□□□□□ -1.52
CASP4P49662 AC019322.1-201ENST00000571869 389 ntBASIC5.58□□□□□ -1.52
CASP4P49662 MIR4660-201ENST00000583549 74 ntBASIC5.58□□□□□ -1.52
CASP4P49662 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.58□□□□□ -1.52
CASP4P49662 AP000894.4-201ENST00000610185 483 ntBASIC5.58□□□□□ -1.52
CASP4P49662 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CASP4P49662 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CASP4P49662 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CASP4P49662 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CASP4P49662 AL590763.1-201ENST00000398297 1545 ntBASIC5.58□□□□□ -1.52
CASP4P49662 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CASP4P49662 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CASP4P49662 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CASP4P49662 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.57□□□□□ -1.52
CASP4P49662 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CASP4P49662 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.57□□□□□ -1.52
CASP4P49662 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CASP4P49662 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.57□□□□□ -1.52
CASP4P49662 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.57□□□□□ -1.52
CASP4P49662 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CASP4P49662 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CASP4P49662 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CASP4P49662 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CASP4P49662 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CASP4P49662 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.57□□□□□ -1.52
CASP4P49662 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CASP4P49662 SNORA2.3-201ENST00000383920 135 ntBASIC5.57□□□□□ -1.52
CASP4P49662 RN7SKP114-201ENST00000410327 279 ntBASIC5.57□□□□□ -1.52
CASP4P49662 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.57□□□□□ -1.52
CASP4P49662 AC005033.1-201ENST00000428904 813 ntBASIC5.57□□□□□ -1.52
CASP4P49662 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.57□□□□□ -1.52
CASP4P49662 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.57□□□□□ -1.52
CASP4P49662 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.57□□□□□ -1.52
CASP4P49662 AC110749.1-201ENST00000462007 357 ntBASIC5.57□□□□□ -1.52
CASP4P49662 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.57□□□□□ -1.52
CASP4P49662 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CASP4P49662 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.57□□□□□ -1.52
CASP4P49662 AP002373.2-201ENST00000541631 1060 ntBASIC5.57□□□□□ -1.52
CASP4P49662 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.57□□□□□ -1.52
CASP4P49662 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.57□□□□□ -1.52
CASP4P49662 MIR3691-201ENST00000578066 90 ntBASIC5.57□□□□□ -1.52
CASP4P49662 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.57□□□□□ -1.52
CASP4P49662 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.57□□□□□ -1.52
CASP4P49662 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.57□□□□□ -1.52
CASP4P49662 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CASP4P49662 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CASP4P49662 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.57□□□□□ -1.52
CASP4P49662 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.57□□□□□ -1.52
CASP4P49662 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CASP4P49662 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.57□□□□□ -1.52
CASP4P49662 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.57□□□□□ -1.52
CASP4P49662 AC026523.2-201ENST00000625039 7739 ntBASIC5.57□□□□□ -1.52
CASP4P49662 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CASP4P49662 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CASP4P49662 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.56□□□□□ -1.52
CASP4P49662 AC006484.1-201ENST00000435086 1884 ntBASIC5.56□□□□□ -1.52
CASP4P49662 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
CASP4P49662 HCFC2P1-201ENST00000392864 1592 ntBASIC5.56□□□□□ -1.52
CASP4P49662 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
CASP4P49662 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CASP4P49662 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.56□□□□□ -1.52
CASP4P49662 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CASP4P49662 RNU1-106P-201ENST00000384382 164 ntBASIC5.56□□□□□ -1.52
CASP4P49662 AC211486.3-201ENST00000412694 621 ntBASIC5.56□□□□□ -1.52
CASP4P49662 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.56□□□□□ -1.52
CASP4P49662 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.56□□□□□ -1.52
CASP4P49662 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.56□□□□□ -1.52
CASP4P49662 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.56□□□□□ -1.52
CASP4P49662 EEF1B2P5-201ENST00000444820 548 ntBASIC5.56□□□□□ -1.52
CASP4P49662 RNU7-157P-201ENST00000459600 66 ntBASIC5.56□□□□□ -1.52
CASP4P49662 RN7SL443P-201ENST00000464331 290 ntBASIC5.56□□□□□ -1.52
CASP4P49662 RN7SL799P-201ENST00000475891 298 ntBASIC5.56□□□□□ -1.52
CASP4P49662 RN7SL177P-201ENST00000476596 299 ntBASIC5.56□□□□□ -1.52
CASP4P49662 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.56□□□□□ -1.52
CASP4P49662 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.56□□□□□ -1.52
CASP4P49662 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.56□□□□□ -1.52
CASP4P49662 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.56□□□□□ -1.52
CASP4P49662 AC015849.6-201ENST00000605454 474 ntBASIC5.56□□□□□ -1.52
CASP4P49662 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.56□□□□□ -1.52
CASP4P49662 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CASP4P49662 AC011755.1-201ENST00000623763 2049 ntBASIC5.56□□□□□ -1.52
CASP4P49662 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CASP4P49662 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CASP4P49662 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CASP4P49662 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.56□□□□□ -1.52
CASP4P49662 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CASP4P49662 RARSP1-201ENST00000542842 1418 ntBASIC5.56□□□□□ -1.52
CASP4P49662 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.56□□□□□ -1.52
CASP4P49662 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.56□□□□□ -1.52
CASP4P49662 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CASP4P49662 CASC19-221ENST00000641309 1382 ntBASIC5.55□□□□□ -1.52
CASP4P49662 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CASP4P49662 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
CASP4P49662 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CASP4P49662 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CASP4P49662 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms