Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC133555.2-201ENST00000550213 292 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.76□□□□□ -1.65
SPTA1P02549 AC007346.2-201ENST00000564816 892 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 AC024220.1-201ENST00000603675 484 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 AL356218.2-201ENST00000605264 187 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SPTA1P02549 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.76□□□□□ -1.65
SPTA1P02549 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SPTA1P02549 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
SPTA1P02549 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
SPTA1P02549 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.76□□□□□ -1.65
SPTA1P02549 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.76□□□□□ -1.65
SPTA1P02549 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SPTA1P02549 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC4.76□□□□□ -1.65
SPTA1P02549 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 RNU4-39P-201ENST00000362455 127 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 RN7SKP149-201ENST00000363008 344 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 CEACAMP8-201ENST00000413902 580 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 EI24P4-201ENST00000423683 1078 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 AL451136.1-201ENST00000435399 325 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.76□□□□□ -1.65
SPTA1P02549 AL139041.1-201ENST00000605480 610 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 MIR6075-201ENST00000620782 95 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 AC011944.2-201ENST00000624440 683 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SPTA1P02549 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC4.76□□□□□ -1.65
SPTA1P02549 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPTA1P02549 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SPTA1P02549 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SPTA1P02549 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
SPTA1P02549 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC4.75□□□□□ -1.65
SPTA1P02549 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SPTA1P02549 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SPTA1P02549 SNORD1C-201ENST00000363315 78 ntBASIC4.75□□□□□ -1.65
SPTA1P02549 SNORA70C-201ENST00000384538 135 ntBASIC4.75□□□□□ -1.65
SPTA1P02549 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SPTA1P02549 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.75□□□□□ -1.65
SPTA1P02549 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.75□□□□□ -1.65
SPTA1P02549 TOMM22P4-201ENST00000511318 336 ntBASIC4.75□□□□□ -1.65
SPTA1P02549 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.75□□□□□ -1.65
SPTA1P02549 MIR4691-201ENST00000583764 85 ntBASIC4.75□□□□□ -1.65
SPTA1P02549 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC4.75□□□□□ -1.65
SPTA1P02549 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.75□□□□□ -1.65
SPTA1P02549 AC073869.8-201ENST00000641806 335 ntBASIC4.75□□□□□ -1.65
SPTA1P02549 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC4.75□□□□□ -1.65
SPTA1P02549 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SPTA1P02549 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SPTA1P02549 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SPTA1P02549 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.75□□□□□ -1.65
SPTA1P02549 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SPTA1P02549 BCORP1-203ENST00000513194 5093 ntBASIC4.75□□□□□ -1.65
SPTA1P02549 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SPTA1P02549 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SPTA1P02549 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC4.75□□□□□ -1.65
SPTA1P02549 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SPTA1P02549 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.75□□□□□ -1.65
SPTA1P02549 AC096921.1-201ENST00000411661 375 ntBASIC4.75□□□□□ -1.65
SPTA1P02549 AC007559.1-201ENST00000428736 355 ntBASIC4.75□□□□□ -1.65
SPTA1P02549 TMEM183AP1-205ENST00000432739 290 ntBASIC4.75□□□□□ -1.65
SPTA1P02549 RN7SL443P-201ENST00000464331 290 ntBASIC4.75□□□□□ -1.65
SPTA1P02549 AC006967.1-201ENST00000467608 589 ntBASIC4.75□□□□□ -1.65
SPTA1P02549 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC4.75□□□□□ -1.65
SPTA1P02549 AC005341.1-201ENST00000571086 708 ntBASIC4.75□□□□□ -1.65
SPTA1P02549 AC069366.1-201ENST00000583159 838 ntBASIC4.75□□□□□ -1.65
SPTA1P02549 MAPK10-323ENST00000641493 3207 ntBASIC4.75□□□□□ -1.65
SPTA1P02549 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SPTA1P02549 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.75□□□□□ -1.65
SPTA1P02549 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SPTA1P02549 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SPTA1P02549 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SPTA1P02549 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.74□□□□□ -1.65
SPTA1P02549 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.74□□□□□ -1.65
SPTA1P02549 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SPTA1P02549 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SPTA1P02549 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.74□□□□□ -1.65
SPTA1P02549 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
SPTA1P02549 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.74□□□□□ -1.65
SPTA1P02549 AC079922.1-201ENST00000443291 359 ntBASIC4.74□□□□□ -1.65
SPTA1P02549 IGBP1P3-201ENST00000447449 1000 ntBASIC4.74□□□□□ -1.65
SPTA1P02549 AC021106.1-201ENST00000509020 1058 ntBASIC4.74□□□□□ -1.65
SPTA1P02549 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.74□□□□□ -1.65
SPTA1P02549 AP001781.1-201ENST00000530977 207 ntBASIC4.74□□□□□ -1.65
SPTA1P02549 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SPTA1P02549 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC4.74□□□□□ -1.65
SPTA1P02549 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.74□□□□□ -1.65
SPTA1P02549 AP005403.1-201ENST00000579720 229 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms