Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL035090.1-201ENST00000454835 332 ntBASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC015864.1-201ENST00000496512 544 ntBASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 RN7SKP253-201ENST00000516424 309 ntBASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 OR5AM1P-201ENST00000532136 1032 ntBASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 EDDM3DP-201ENST00000554692 434 ntBASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 RPL10P14-201ENST00000565265 298 ntBASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 SCARNA15-201ENST00000607520 4325 ntBASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TMX2-CTNND1H3BSU7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 RNU1-106P-201ENST00000384382 164 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 HIGD1AP8-201ENST00000453927 274 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 Z92846.1-201ENST00000456203 268 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 GTF2F2P1-201ENST00000511083 675 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 RNU6-513P-201ENST00000516104 104 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC020937.1-201ENST00000519677 1013 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC092709.1-201ENST00000521355 1045 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 OR4A17P-201ENST00000526032 904 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC127381.1-201ENST00000555979 939 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC009597.2-201ENST00000604659 592 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 EIF3FP1-201ENST00000613970 806 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL353662.3-201ENST00000625131 237 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 CYP4F35P-202ENST00000636121 390 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 ICE2P1-201ENST00000512800 1849 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC104260.2-201ENST00000623551 3497 ntBASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC096921.1-201ENST00000411661 375 ntBASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 LINC02210-201ENST00000444561 288 ntBASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC091685.2-201ENST00000454924 864 ntBASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 TPT1P1-201ENST00000458495 518 ntBASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC021193.1-201ENST00000511607 420 ntBASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 EIF3KP3-201ENST00000514461 639 ntBASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 NMNAT1P5-201ENST00000559657 841 ntBASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 RN7SL290P-201ENST00000578661 300 ntBASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 MIR6820-201ENST00000611508 62 ntBASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms