Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL354714.3-201ENST00000447284 493 ntBASIC5.4□□□□□ -1.54
CISHQ9NSE2 NDUFA5P8-201ENST00000449019 346 ntBASIC5.4□□□□□ -1.54
CISHQ9NSE2 AC021660.1-201ENST00000465006 554 ntBASIC5.4□□□□□ -1.54
CISHQ9NSE2 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CISHQ9NSE2 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.4□□□□□ -1.54
CISHQ9NSE2 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.4□□□□□ -1.54
CISHQ9NSE2 RN7SKP66-201ENST00000516681 231 ntBASIC5.4□□□□□ -1.54
CISHQ9NSE2 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CISHQ9NSE2 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.4□□□□□ -1.54
CISHQ9NSE2 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.4□□□□□ -1.54
CISHQ9NSE2 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.4□□□□□ -1.54
CISHQ9NSE2 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CISHQ9NSE2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.4□□□□□ -1.54
CISHQ9NSE2 AL512310.9-201ENST00000553311 948 ntBASIC5.4□□□□□ -1.54
CISHQ9NSE2 AC006349.1-201ENST00000555526 235 ntBASIC5.4□□□□□ -1.54
CISHQ9NSE2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CISHQ9NSE2 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.4□□□□□ -1.54
CISHQ9NSE2 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.4□□□□□ -1.54
CISHQ9NSE2 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.4□□□□□ -1.54
CISHQ9NSE2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CISHQ9NSE2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CISHQ9NSE2 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CISHQ9NSE2 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CISHQ9NSE2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CISHQ9NSE2 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CISHQ9NSE2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.4□□□□□ -1.55
CISHQ9NSE2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.4□□□□□ -1.55
CISHQ9NSE2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CISHQ9NSE2 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CISHQ9NSE2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CISHQ9NSE2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 BX284613.1-201ENST00000452221 1641 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 RNA5SP455-201ENST00000365190 119 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CISHQ9NSE2 SNORA66-201ENST00000384792 133 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 RHOT1P3-201ENST00000436571 331 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 RPS29P9-201ENST00000440360 171 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 TCEA1P1-201ENST00000449716 880 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 IGHV5-78-201ENST00000450948 295 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 AC026348.1-201ENST00000462549 1053 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 RPSAP50-201ENST00000481955 852 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 AC109462.1-201ENST00000491087 368 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 COX6B1P5-201ENST00000509843 249 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 AC004980.4-201ENST00000513375 203 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 RNA5SP230-201ENST00000517039 122 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 AC012339.2-201ENST00000523996 453 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 OR7E128P-201ENST00000532736 1024 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 AC090286.3-201ENST00000573133 187 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 AC127024.5-201ENST00000580085 462 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 AC093799.2-201ENST00000610062 578 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CISHQ9NSE2 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CISHQ9NSE2 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.39□□□□□ -1.55
CISHQ9NSE2 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CISHQ9NSE2 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.39□□□□□ -1.55
CISHQ9NSE2 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CISHQ9NSE2 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CISHQ9NSE2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.38□□□□□ -1.55
CISHQ9NSE2 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CISHQ9NSE2 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CISHQ9NSE2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CISHQ9NSE2 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.38□□□□□ -1.55
CISHQ9NSE2 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CISHQ9NSE2 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CISHQ9NSE2 RNA5SP507-201ENST00000363603 121 ntBASIC5.38□□□□□ -1.55
CISHQ9NSE2 ATP5HP3-201ENST00000396994 486 ntBASIC5.38□□□□□ -1.55
CISHQ9NSE2 SPTLC1P2-201ENST00000407089 121 ntBASIC5.38□□□□□ -1.55
CISHQ9NSE2 AL627308.1-201ENST00000435693 821 ntBASIC5.38□□□□□ -1.55
CISHQ9NSE2 TXNP5-201ENST00000441043 315 ntBASIC5.38□□□□□ -1.55
CISHQ9NSE2 HMGB1P4-201ENST00000455362 567 ntBASIC5.38□□□□□ -1.55
CISHQ9NSE2 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.38□□□□□ -1.55
CISHQ9NSE2 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.38□□□□□ -1.55
CISHQ9NSE2 RNA5SP43-201ENST00000516559 110 ntBASIC5.38□□□□□ -1.55
CISHQ9NSE2 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.38□□□□□ -1.55
CISHQ9NSE2 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.38□□□□□ -1.55
CISHQ9NSE2 AC013701.1-201ENST00000522657 465 ntBASIC5.38□□□□□ -1.55
CISHQ9NSE2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms