Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 SPATA2P1-201ENST00000431223 2055 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 SNORA64.1-201ENST00000362600 132 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 SNORD65-201ENST00000391079 73 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 RPL10P10-201ENST00000403509 664 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 Z82198.3-201ENST00000421145 199 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 OR2AH1P-201ENST00000425717 928 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC124944.2-201ENST00000429866 1242 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 KCTD9P1-201ENST00000430462 1167 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 MTND2P2-201ENST00000434633 945 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC046176.1-201ENST00000435260 1170 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 CALM1P2-201ENST00000452941 448 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 PPIAP27-201ENST00000453800 265 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 CST12P-201ENST00000457644 362 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC106822.1-201ENST00000502647 526 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 HMGB3P16-201ENST00000508037 287 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 RNU2-45P-201ENST00000516068 187 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 RNA5SP340-201ENST00000517132 107 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 SEC11B-201ENST00000518383 499 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 OR4A41P-201ENST00000533053 928 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 OR8G3P-201ENST00000533406 921 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC008147.3-201ENST00000548666 354 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AP005403.1-201ENST00000579720 229 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC011840.5-201ENST00000582125 771 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC009027.1-201ENST00000604510 479 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 TAS2R6P-201ENST00000605022 826 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC091167.5-201ENST00000605689 894 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AP001962.1-201ENST00000624114 559 ntBASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SND1-IT1Q9HBX3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 RN7SKP250-201ENST00000363924 321 ntBASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 RNA5SP223-201ENST00000365174 120 ntBASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 MIR191-201ENST00000384873 92 ntBASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 MIR551A-201ENST00000385042 96 ntBASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 AL034417.1-201ENST00000399343 800 ntBASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 RMRPP5-201ENST00000411156 267 ntBASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 AC009302.1-201ENST00000417147 390 ntBASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 OR5M12P-201ENST00000423388 929 ntBASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC3.54□□□□□ -1.84
SND1-IT1Q9HBX3 AL389925.1-201ENST00000432257 728 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms