Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 BTG1P1-201ENST00000540396 508 ntBASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 EIF1AXP2-201ENST00000555940 413 ntBASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AC114786.1-201ENST00000512892 1415 ntBASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AC097461.1-201ENST00000568928 2821 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 SNORA16A-201ENST00000384342 137 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AC245060.4-201ENST00000413293 1121 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 SRSF1P1-201ENST00000424058 520 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 NAP1L4P2-201ENST00000425958 899 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AC009238.2-201ENST00000431026 355 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 GSTM5P1-201ENST00000434751 660 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 GAPDHP25-201ENST00000447061 1001 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 MRPL35P2-201ENST00000448009 511 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 LRRC37A14P-201ENST00000452297 462 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 RPS6P2-201ENST00000454208 705 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 RN7SL189P-201ENST00000468631 289 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 RN7SL423P-201ENST00000486202 304 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 OR52A4P-203ENST00000498233 1014 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 MRPS5P3-201ENST00000515577 166 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AC134698.5-201ENST00000519444 336 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AC068305.2-201ENST00000550567 1205 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 MIR3154-201ENST00000577829 84 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AC005252.1-201ENST00000604518 1063 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AC107905.1-201ENST00000616204 426 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AC108359.1-201ENST00000616451 1211 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AC074140.1-201ENST00000621617 208 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 OR51C1P-202ENST00000641159 1444 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 YES1P1-201ENST00000418510 1628 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 KARSP1-201ENST00000451871 1752 ntBASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC28BQ9BUN5 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 RNA5SP232-201ENST00000364144 119 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 RNU4-2-201ENST00000365668 141 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AC244453.4-201ENST00000419150 388 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AL161722.2-201ENST00000434731 981 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 RSL24D1P2-201ENST00000445584 366 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AL133372.1-201ENST00000493565 745 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AC122718.2-201ENST00000505325 591 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AC006427.1-201ENST00000514359 712 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 RNA5SP360-201ENST00000516555 118 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 RNU4-18P-201ENST00000516751 149 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 SNORA43.3-201ENST00000517240 103 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AP002373.2-201ENST00000541631 1060 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AC092121.1-201ENST00000569452 202 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 AP001496.3-201ENST00000580230 913 ntBASIC5.1□□□□□ -1.59
CCDC28BQ9BUN5 RN7SL176P-201ENST00000580352 264 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms