Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 MTND3P13-201ENST00000574391 343 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC008088.1-201ENST00000580993 280 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC119403.2-201ENST00000590960 598 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC064807.4-201ENST00000607201 407 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AL135999.3-201ENST00000610501 812 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 MIR6861-201ENST00000618657 64 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC022079.2-201ENST00000619739 566 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC091304.6-201ENST00000619761 202 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX18Q96RF0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX18Q96RF0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC099786.3-201ENST00000565735 1410 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 AC020633.1-201ENST00000468439 2247 ntBASIC5.47□□□□□ -1.53
SNX18Q96RF0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX18Q96RF0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.46□□□□□ -1.53
SNX18Q96RF0 AP001029.2-203ENST00000589795 4910 ntBASIC5.46□□□□□ -1.53
SNX18Q96RF0 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNX18Q96RF0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX18Q96RF0 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX18Q96RF0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNX18Q96RF0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX18Q96RF0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX18Q96RF0 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX18Q96RF0 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 MIR188-201ENST00000385034 86 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 AL157702.1-201ENST00000398764 426 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 SNORA77.2-201ENST00000408571 112 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNX18Q96RF0 MTCO3P4-201ENST00000419236 787 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 OR2X1P-201ENST00000421144 687 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC006065.1-201ENST00000422539 802 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC099782.1-201ENST00000425889 474 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 NDUFA5P10-201ENST00000432147 357 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 RPL12P11-201ENST00000439970 501 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 CXCR2P1-202ENST00000443392 1074 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 AL157827.1-201ENST00000447622 132 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC008280.2-201ENST00000455473 307 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 NAP1L1P3-201ENST00000462291 880 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 RPS12P31-201ENST00000491419 398 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC134050.1-201ENST00000495088 933 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 RPS26P24-201ENST00000497656 331 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 RNA5SP434-201ENST00000516647 121 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 Y_RNA.710-201ENST00000516975 110 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX18Q96RF0 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 AL845552.1-201ENST00000556820 323 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 ZNF971P-201ENST00000562068 1249 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 NDUFA5P11-201ENST00000567995 343 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC002310.3-201ENST00000569728 723 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 MIR4310-201ENST00000582950 57 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 SMIM12P1-201ENST00000603004 274 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 AP001823.1-201ENST00000604056 1003 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 AC025175.1-201ENST00000606482 759 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 PART1_2.1-201ENST00000612397 250 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX18Q96RF0 RN7SL261P-201ENST00000613441 282 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms