Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RNU2-18P-201ENST00000411224 162 ntBASIC5.29□□□□□ -1.56
CDH13P55290 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH13P55290 MTND2P11-201ENST00000423638 648 ntBASIC5.29□□□□□ -1.56
CDH13P55290 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH13P55290 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH13P55290 AL450996.1-201ENST00000445574 1202 ntBASIC5.29□□□□□ -1.56
CDH13P55290 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH13P55290 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CDH13P55290 MTND2P25-201ENST00000449028 610 ntBASIC5.29□□□□□ -1.56
CDH13P55290 LRRC37A14P-201ENST00000452297 462 ntBASIC5.29□□□□□ -1.56
CDH13P55290 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH13P55290 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH13P55290 AC021087.2-201ENST00000504656 1203 ntBASIC5.29□□□□□ -1.56
CDH13P55290 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH13P55290 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH13P55290 RNU6-467P-201ENST00000517027 110 ntBASIC5.29□□□□□ -1.56
CDH13P55290 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH13P55290 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.29□□□□□ -1.56
CDH13P55290 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH13P55290 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH13P55290 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH13P55290 IGBP1P1-201ENST00000554337 1009 ntBASIC5.29□□□□□ -1.56
CDH13P55290 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH13P55290 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH13P55290 AC009852.2-201ENST00000567898 485 ntBASIC5.29□□□□□ -1.56
CDH13P55290 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH13P55290 SNX6P1-201ENST00000601728 1224 ntBASIC5.29□□□□□ -1.56
CDH13P55290 PPATP2-201ENST00000605635 508 ntBASIC5.29□□□□□ -1.56
CDH13P55290 AC108865.2-201ENST00000606881 432 ntBASIC5.29□□□□□ -1.56
CDH13P55290 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH13P55290 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH13P55290 AC099654.6-201ENST00000636487 512 ntBASIC5.29□□□□□ -1.56
CDH13P55290 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH13P55290 AL031595.2-201ENST00000624215 19071 ntBASIC5.29□□□□□ -1.56
CDH13P55290 CASC19-281ENST00000642118 1554 ntBASIC5.29□□□□□ -1.56
CDH13P55290 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.29□□□□□ -1.56
CDH13P55290 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH13P55290 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH13P55290 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH13P55290 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CDH13P55290 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH13P55290 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 AC110792.3-201ENST00000595906 1614 ntBASIC5.28□□□□□ -1.56
CDH13P55290 SNORD115-48-201ENST00000364764 76 ntBASIC5.28□□□□□ -1.56
CDH13P55290 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH13P55290 OR1L6-202ENST00000373684 1044 ntBASIC5.28□□□□□ -1.56
CDH13P55290 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH13P55290 RN7SKP240-201ENST00000410583 375 ntBASIC5.28□□□□□ -1.56
CDH13P55290 RPS26P13-201ENST00000419030 330 ntBASIC5.28□□□□□ -1.56
CDH13P55290 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH13P55290 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH13P55290 AC073464.3-201ENST00000422564 712 ntBASIC5.28□□□□□ -1.56
CDH13P55290 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH13P55290 AKR1B10P1-201ENST00000425765 942 ntBASIC5.28□□□□□ -1.56
CDH13P55290 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH13P55290 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 RPL19P16-201ENST00000433839 588 ntBASIC5.28□□□□□ -1.56
CDH13P55290 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH13P55290 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH13P55290 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH13P55290 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH13P55290 EEF1B2P6-201ENST00000445713 673 ntBASIC5.28□□□□□ -1.56
CDH13P55290 AL353718.1-201ENST00000451028 517 ntBASIC5.28□□□□□ -1.56
CDH13P55290 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 AC069277.2-201ENST00000454211 432 ntBASIC5.28□□□□□ -1.56
CDH13P55290 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH13P55290 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 HMGB1P3-201ENST00000502802 616 ntBASIC5.28□□□□□ -1.56
CDH13P55290 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH13P55290 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH13P55290 AC021146.7-201ENST00000509604 775 ntBASIC5.28□□□□□ -1.56
CDH13P55290 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH13P55290 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH13P55290 IGKV2-4-201ENST00000523070 340 ntBASIC5.28□□□□□ -1.56
CDH13P55290 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH13P55290 NANOGNBP2-201ENST00000544753 553 ntBASIC5.28□□□□□ -1.56
CDH13P55290 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH13P55290 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH13P55290 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 MIR4271-201ENST00000582451 67 ntBASIC5.28□□□□□ -1.56
CDH13P55290 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH13P55290 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.28□□□□□ -1.56
CDH13P55290 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH13P55290 AL355802.4-201ENST00000607635 548 ntBASIC5.28□□□□□ -1.56
CDH13P55290 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 CR589904.2-201ENST00000612533 440 ntBASIC5.28□□□□□ -1.56
CDH13P55290 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 FRG1EP-201ENST00000634469 770 ntBASIC5.28□□□□□ -1.56
CDH13P55290 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH13P55290 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CDH13P55290 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH13P55290 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms