Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RN7SL52P-201ENST00000584271 284 ntBASIC5.82□□□□□ -1.48
VCPP55072 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.82□□□□□ -1.48
VCPP55072 AC087783.2-201ENST00000605070 562 ntBASIC5.82□□□□□ -1.48
VCPP55072 RN7SL722P-201ENST00000617780 284 ntBASIC5.82□□□□□ -1.48
VCPP55072 RN7SL565P-201ENST00000618246 284 ntBASIC5.82□□□□□ -1.48
VCPP55072 AC099654.6-201ENST00000636487 512 ntBASIC5.82□□□□□ -1.48
VCPP55072 AC073869.10-201ENST00000642016 354 ntBASIC5.82□□□□□ -1.48
VCPP55072 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
VCPP55072 PANDAR-201ENST00000629595 1506 ntBASIC5.82□□□□□ -1.48
VCPP55072 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.82□□□□□ -1.48
VCPP55072 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
VCPP55072 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.82□□□□□ -1.48
VCPP55072 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 CDC27P2-201ENST00000425026 1922 ntBASIC5.82□□□□□ -1.48
VCPP55072 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
VCPP55072 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VCPP55072 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
VCPP55072 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VCPP55072 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VCPP55072 HCFC2P1-201ENST00000392864 1592 ntBASIC5.81□□□□□ -1.48
VCPP55072 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VCPP55072 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VCPP55072 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VCPP55072 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
VCPP55072 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
VCPP55072 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.81□□□□□ -1.48
VCPP55072 SNORA5.1-201ENST00000384275 131 ntBASIC5.81□□□□□ -1.48
VCPP55072 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.81□□□□□ -1.48
VCPP55072 COX6CP17-201ENST00000421389 185 ntBASIC5.81□□□□□ -1.48
VCPP55072 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.81□□□□□ -1.48
VCPP55072 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.81□□□□□ -1.48
VCPP55072 RBMY2QP-201ENST00000429799 1147 ntBASIC5.81□□□□□ -1.48
VCPP55072 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.81□□□□□ -1.48
VCPP55072 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.81□□□□□ -1.48
VCPP55072 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.81□□□□□ -1.48
VCPP55072 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.81□□□□□ -1.48
VCPP55072 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
VCPP55072 RPS3AP41-201ENST00000462701 778 ntBASIC5.81□□□□□ -1.48
VCPP55072 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.81□□□□□ -1.48
VCPP55072 RN7SL459P-201ENST00000481078 302 ntBASIC5.81□□□□□ -1.48
VCPP55072 RPSAP51-201ENST00000497462 645 ntBASIC5.81□□□□□ -1.48
VCPP55072 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.81□□□□□ -1.48
VCPP55072 SEPT10P1-201ENST00000517342 1162 ntBASIC5.81□□□□□ -1.48
VCPP55072 PMS2P3-207ENST00000529061 717 ntBASIC5.81□□□□□ -1.48
VCPP55072 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.81□□□□□ -1.48
VCPP55072 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.81□□□□□ -1.48
VCPP55072 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.81□□□□□ -1.48
VCPP55072 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VCPP55072 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.81□□□□□ -1.48
VCPP55072 LINC01739-205ENST00000641890 573 ntBASIC5.81□□□□□ -1.48
VCPP55072 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.81□□□□□ -1.48
VCPP55072 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
VCPP55072 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VCPP55072 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VCPP55072 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
VCPP55072 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VCPP55072 AC123912.3-201ENST00000600907 1367 ntBASIC5.8□□□□□ -1.48
VCPP55072 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
VCPP55072 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.8□□□□□ -1.48
VCPP55072 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.8□□□□□ -1.48
VCPP55072 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.8□□□□□ -1.48
VCPP55072 AC006484.1-201ENST00000435086 1884 ntBASIC5.8□□□□□ -1.48
VCPP55072 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VCPP55072 AC092681.1-201ENST00000297369 291 ntBASIC5.8□□□□□ -1.48
VCPP55072 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.8□□□□□ -1.48
VCPP55072 RNU4-2-201ENST00000365668 141 ntBASIC5.8□□□□□ -1.48
VCPP55072 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.8□□□□□ -1.48
VCPP55072 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VCPP55072 AC108075.1-201ENST00000424692 529 ntBASIC5.8□□□□□ -1.48
VCPP55072 PRUNEP1-201ENST00000425846 705 ntBASIC5.8□□□□□ -1.48
VCPP55072 NDUFB4P8-201ENST00000435351 367 ntBASIC5.8□□□□□ -1.48
VCPP55072 BTG3P1-201ENST00000435859 716 ntBASIC5.8□□□□□ -1.48
VCPP55072 AL596266.1-201ENST00000448132 400 ntBASIC5.8□□□□□ -1.48
VCPP55072 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.8□□□□□ -1.48
VCPP55072 AL389915.2-201ENST00000454576 441 ntBASIC5.8□□□□□ -1.48
VCPP55072 RPS3AP53-201ENST00000454716 778 ntBASIC5.8□□□□□ -1.48
VCPP55072 NDUFA5P9-201ENST00000472609 340 ntBASIC5.8□□□□□ -1.48
VCPP55072 STRADBP1-201ENST00000478954 1281 ntBASIC5.8□□□□□ -1.48
VCPP55072 IGLV2-34-201ENST00000490007 283 ntBASIC5.8□□□□□ -1.48
VCPP55072 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.8□□□□□ -1.48
VCPP55072 OR5AM1P-201ENST00000532136 1032 ntBASIC5.8□□□□□ -1.48
VCPP55072 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.8□□□□□ -1.48
VCPP55072 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.8□□□□□ -1.48
VCPP55072 AC010547.7-201ENST00000570323 333 ntBASIC5.8□□□□□ -1.48
VCPP55072 MIR4311-201ENST00000580794 100 ntBASIC5.8□□□□□ -1.48
VCPP55072 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
VCPP55072 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.8□□□□□ -1.48
VCPP55072 SS18L2P2-201ENST00000583960 235 ntBASIC5.8□□□□□ -1.48
VCPP55072 AC008745.1-201ENST00000604064 271 ntBASIC5.8□□□□□ -1.48
VCPP55072 AC000068.2-201ENST00000608816 460 ntBASIC5.8□□□□□ -1.48
VCPP55072 AC011493.1-201ENST00000596753 1632 ntBASIC5.8□□□□□ -1.48
VCPP55072 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.8□□□□□ -1.48
VCPP55072 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VCPP55072 AC079097.1-201ENST00000512187 1399 ntBASIC5.8□□□□□ -1.48
VCPP55072 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms