Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 RN7SKP153-201ENST00000365026 316 ntBASIC8.97□□□□□ -0.97
SMARCA2P51531 AL359837.1-201ENST00000381357 287 ntBASIC8.97□□□□□ -0.97
SMARCA2P51531 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC8.97□□□□□ -0.97
SMARCA2P51531 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC8.97□□□□□ -0.97
SMARCA2P51531 AC114755.2-201ENST00000413520 361 ntBASIC8.97□□□□□ -0.97
SMARCA2P51531 AC116562.1-201ENST00000485355 781 ntBASIC8.97□□□□□ -0.97
SMARCA2P51531 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC8.97□□□□□ -0.97
SMARCA2P51531 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC8.97□□□□□ -0.97
SMARCA2P51531 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC8.97□□□□□ -0.97
SMARCA2P51531 AP001804.1-201ENST00000526868 919 ntBASIC8.97□□□□□ -0.97
SMARCA2P51531 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC8.97□□□□□ -0.97
SMARCA2P51531 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC8.97□□□□□ -0.97
SMARCA2P51531 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.97□□□□□ -0.97
SMARCA2P51531 AP000756.2-201ENST00000624168 2567 ntBASIC8.97□□□□□ -0.97
SMARCA2P51531 CCT8P1-201ENST00000413611 1657 ntBASIC8.97□□□□□ -0.97
SMARCA2P51531 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SMARCA2P51531 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SMARCA2P51531 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
SMARCA2P51531 SNORA37-201ENST00000384504 129 ntBASIC8.96□□□□□ -0.97
SMARCA2P51531 FABP7P1-201ENST00000424004 391 ntBASIC8.96□□□□□ -0.97
SMARCA2P51531 RPL23AP56-201ENST00000460778 453 ntBASIC8.96□□□□□ -0.97
SMARCA2P51531 RN7SL443P-201ENST00000464331 290 ntBASIC8.96□□□□□ -0.97
SMARCA2P51531 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC8.96□□□□□ -0.97
SMARCA2P51531 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC8.96□□□□□ -0.97
SMARCA2P51531 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC8.96□□□□□ -0.97
SMARCA2P51531 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC8.96□□□□□ -0.97
SMARCA2P51531 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SMARCA2P51531 OR56B2P-202ENST00000641377 2453 ntBASIC8.96□□□□□ -0.98
SMARCA2P51531 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SMARCA2P51531 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SMARCA2P51531 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SMARCA2P51531 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 RNA5SP447-201ENST00000363749 119 ntBASIC8.95□□□□□ -0.98
SMARCA2P51531 SNORA2.3-201ENST00000383920 135 ntBASIC8.95□□□□□ -0.98
SMARCA2P51531 AL591848.1-201ENST00000413092 322 ntBASIC8.95□□□□□ -0.98
SMARCA2P51531 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC8.95□□□□□ -0.98
SMARCA2P51531 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC8.95□□□□□ -0.98
SMARCA2P51531 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC8.95□□□□□ -0.98
SMARCA2P51531 RN7SL189P-201ENST00000468631 289 ntBASIC8.95□□□□□ -0.98
SMARCA2P51531 AC022360.1-201ENST00000521058 340 ntBASIC8.95□□□□□ -0.98
SMARCA2P51531 CYCSP29-201ENST00000533731 318 ntBASIC8.95□□□□□ -0.98
SMARCA2P51531 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC8.95□□□□□ -0.98
SMARCA2P51531 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC8.95□□□□□ -0.98
SMARCA2P51531 AC069366.1-201ENST00000583159 838 ntBASIC8.95□□□□□ -0.98
SMARCA2P51531 AP001357.1-201ENST00000586304 1053 ntBASIC8.95□□□□□ -0.98
SMARCA2P51531 MIR6716-201ENST00000613413 80 ntBASIC8.95□□□□□ -0.98
SMARCA2P51531 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
SMARCA2P51531 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC8.95□□□□□ -0.98
SMARCA2P51531 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC8.95□□□□□ -0.98
SMARCA2P51531 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC8.95□□□□□ -0.98
SMARCA2P51531 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
SMARCA2P51531 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC8.95□□□□□ -0.98
SMARCA2P51531 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SMARCA2P51531 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC8.95□□□□□ -0.98
SMARCA2P51531 RPL7AP10-201ENST00000481016 791 ntBASIC8.95□□□□□ -0.98
SMARCA2P51531 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC8.95□□□□□ -0.98
SMARCA2P51531 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC8.95□□□□□ -0.98
SMARCA2P51531 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC8.95□□□□□ -0.98
SMARCA2P51531 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC8.95□□□□□ -0.98
SMARCA2P51531 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC8.95□□□□□ -0.98
SMARCA2P51531 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA2P51531 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA2P51531 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.94□□□□□ -0.98
SMARCA2P51531 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
SMARCA2P51531 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA2P51531 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA2P51531 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC8.94□□□□□ -0.98
SMARCA2P51531 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA2P51531 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA2P51531 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC8.94□□□□□ -0.98
SMARCA2P51531 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
SMARCA2P51531 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA2P51531 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA2P51531 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
SMARCA2P51531 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA2P51531 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA2P51531 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA2P51531 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
SMARCA2P51531 RNA5SP397-201ENST00000391323 118 ntBASIC8.94□□□□□ -0.98
SMARCA2P51531 IGKV1OR9-1-201ENST00000424370 284 ntBASIC8.94□□□□□ -0.98
SMARCA2P51531 TRGV7-201ENST00000427089 353 ntBASIC8.94□□□□□ -0.98
SMARCA2P51531 IMPA1P1-201ENST00000510718 842 ntBASIC8.94□□□□□ -0.98
SMARCA2P51531 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
SMARCA2P51531 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC8.94□□□□□ -0.98
SMARCA2P51531 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA2P51531 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA2P51531 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms