Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.18□□□□□ -1.58
CXCL12P48061 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.18□□□□□ -1.58
CXCL12P48061 snoU13.1-201ENST00000459157 104 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 STRADBP1-201ENST00000478954 1281 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CXCL12P48061 IGBP1P5-201ENST00000507524 1000 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 AC021106.1-201ENST00000509020 1058 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.18□□□□□ -1.58
CXCL12P48061 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.18□□□□□ -1.58
CXCL12P48061 AC034205.1-201ENST00000520621 638 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.18□□□□□ -1.58
CXCL12P48061 AP003080.1-202ENST00000526526 915 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.18□□□□□ -1.58
CXCL12P48061 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.18□□□□□ -1.58
CXCL12P48061 AC060780.2-201ENST00000589047 198 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 RPL26P30-202ENST00000602923 645 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 AL162431.4-201ENST00000604674 411 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 AL391358.1-201ENST00000605342 190 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 AL353729.2-201ENST00000605859 1249 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 AP001521.2-201ENST00000608772 546 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 AC244107.2-201ENST00000611773 76 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
CXCL12P48061 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL12P48061 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CXCL12P48061 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL12P48061 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.18□□□□□ -1.58
CXCL12P48061 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.18□□□□□ -1.58
CXCL12P48061 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL12P48061 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL12P48061 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.18□□□□□ -1.58
CXCL12P48061 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL12P48061 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.18□□□□□ -1.58
CXCL12P48061 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CXCL12P48061 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.18□□□□□ -1.58
CXCL12P48061 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CXCL12P48061 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CXCL12P48061 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CXCL12P48061 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL12P48061 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CXCL12P48061 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.17□□□□□ -1.58
CXCL12P48061 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL12P48061 SNORA70.2-201ENST00000364506 135 ntBASIC5.17□□□□□ -1.58
CXCL12P48061 RNA5SP113-201ENST00000410486 84 ntBASIC5.17□□□□□ -1.58
CXCL12P48061 RPL6P21-201ENST00000418672 846 ntBASIC5.17□□□□□ -1.58
CXCL12P48061 AC007559.1-201ENST00000428736 355 ntBASIC5.17□□□□□ -1.58
CXCL12P48061 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.17□□□□□ -1.58
CXCL12P48061 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.17□□□□□ -1.58
CXCL12P48061 LINC02210-201ENST00000444561 288 ntBASIC5.17□□□□□ -1.58
CXCL12P48061 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.17□□□□□ -1.58
CXCL12P48061 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CXCL12P48061 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.17□□□□□ -1.58
CXCL12P48061 AC006427.1-201ENST00000514359 712 ntBASIC5.17□□□□□ -1.58
CXCL12P48061 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.17□□□□□ -1.58
CXCL12P48061 RNA5SP43-201ENST00000516559 110 ntBASIC5.17□□□□□ -1.58
CXCL12P48061 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.17□□□□□ -1.58
CXCL12P48061 AP001804.1-201ENST00000526868 919 ntBASIC5.17□□□□□ -1.58
CXCL12P48061 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.17□□□□□ -1.58
CXCL12P48061 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.17□□□□□ -1.58
CXCL12P48061 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.17□□□□□ -1.58
CXCL12P48061 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.17□□□□□ -1.58
CXCL12P48061 AC074050.1-201ENST00000563247 211 ntBASIC5.17□□□□□ -1.58
CXCL12P48061 MIR5096-201ENST00000583713 70 ntBASIC5.17□□□□□ -1.58
CXCL12P48061 AC105254.2-201ENST00000603636 436 ntBASIC5.17□□□□□ -1.58
CXCL12P48061 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.17□□□□□ -1.58
CXCL12P48061 AP005131.7-201ENST00000610087 611 ntBASIC5.17□□□□□ -1.58
CXCL12P48061 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CXCL12P48061 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL12P48061 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
CXCL12P48061 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL12P48061 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL12P48061 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL12P48061 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL12P48061 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL12P48061 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.17□□□□□ -1.58
CXCL12P48061 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CXCL12P48061 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL12P48061 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CXCL12P48061 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 AC092070.2-203ENST00000598377 3644 ntBASIC5.16□□□□□ -1.58
CXCL12P48061 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL12P48061 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 AC092681.1-201ENST00000297369 291 ntBASIC5.16□□□□□ -1.58
CXCL12P48061 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.16□□□□□ -1.58
CXCL12P48061 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL12P48061 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CXCL12P48061 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 AL021331.1-201ENST00000402817 582 ntBASIC5.16□□□□□ -1.58
CXCL12P48061 RPL10P10-201ENST00000403509 664 ntBASIC5.16□□□□□ -1.58
CXCL12P48061 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CXCL12P48061 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.16□□□□□ -1.58
CXCL12P48061 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL12P48061 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms