Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HOXC4P09017 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HOXC4P09017 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC4P09017 RNA5SP187-201ENST00000384400 119 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 MIR589-201ENST00000385238 99 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 AL109941.1-201ENST00000401925 229 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 AL645733.1-201ENST00000402250 217 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HOXC4P09017 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC4P09017 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC4P09017 NPM1P22-201ENST00000427761 952 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 NPM1P18-201ENST00000434232 732 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 PSMD10P3-201ENST00000437000 448 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC4P09017 AL136455.1-201ENST00000441083 1240 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 AC092647.3-201ENST00000443044 633 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 TAAR4P-201ENST00000454843 1039 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 RN7SL826P-201ENST00000479724 288 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 RN7SL814P-201ENST00000487715 300 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.12□□□□□ -1.59
HOXC4P09017 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.12□□□□□ -1.59
HOXC4P09017 AC004980.4-201ENST00000513375 203 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC4P09017 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HOXC4P09017 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC4P09017 AC011626.1-201ENST00000604710 562 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 AC133644.2-201ENST00000608142 540 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC4P09017 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HOXC4P09017 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HOXC4P09017 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC4P09017 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC4P09017 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
HOXC4P09017 AC131971.1-201ENST00000332881 1482 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 NXF4-202ENST00000416098 1465 ntBASIC5.12□□□□□ -1.59
HOXC4P09017 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC4P09017 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC4P09017 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC4P09017 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC4P09017 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC4P09017 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC4P09017 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC4P09017 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC4P09017 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC4P09017 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC4P09017 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HOXC4P09017 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC4P09017 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
HOXC4P09017 RNU4-4P-201ENST00000364588 130 ntBASIC5.11□□□□□ -1.59
HOXC4P09017 HSPD1P12-201ENST00000429127 1069 ntBASIC5.11□□□□□ -1.59
HOXC4P09017 NDUFA5P8-201ENST00000449019 346 ntBASIC5.11□□□□□ -1.59
HOXC4P09017 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC4P09017 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC4P09017 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC4P09017 NDUFB5P1-201ENST00000508134 564 ntBASIC5.11□□□□□ -1.59
HOXC4P09017 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC4P09017 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC4P09017 RN7SKP147-201ENST00000517154 244 ntBASIC5.11□□□□□ -1.59
HOXC4P09017 OR5D15P-201ENST00000531671 942 ntBASIC5.11□□□□□ -1.59
HOXC4P09017 AC068993.1-201ENST00000546724 589 ntBASIC5.11□□□□□ -1.59
HOXC4P09017 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC4P09017 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.11□□□□□ -1.59
HOXC4P09017 AC105036.1-201ENST00000566222 271 ntBASIC5.11□□□□□ -1.59
HOXC4P09017 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC4P09017 AC093799.2-201ENST00000610062 578 ntBASIC5.11□□□□□ -1.59
HOXC4P09017 AL162574.1-201ENST00000615702 950 ntBASIC5.11□□□□□ -1.59
HOXC4P09017 MIR6839-201ENST00000620425 113 ntBASIC5.11□□□□□ -1.59
HOXC4P09017 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC4P09017 AC132825.8-201ENST00000640783 297 ntBASIC5.11□□□□□ -1.59
HOXC4P09017 AC073869.7-201ENST00000640874 297 ntBASIC5.11□□□□□ -1.59
HOXC4P09017 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HOXC4P09017 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HOXC4P09017 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC4P09017 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC4P09017 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC4P09017 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC4P09017 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC4P09017 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HOXC4P09017 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HOXC4P09017 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC4P09017 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC4P09017 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
HOXC4P09017 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC4P09017 RN7SKP145-201ENST00000363291 303 ntBASIC5.1□□□□□ -1.59
HOXC4P09017 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC4P09017 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC4P09017 AC009238.2-201ENST00000431026 355 ntBASIC5.1□□□□□ -1.59
HOXC4P09017 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC4P09017 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC4P09017 AC013410.1-201ENST00000436223 1232 ntBASIC5.1□□□□□ -1.59
HOXC4P09017 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC4P09017 OTX2P1-201ENST00000450956 354 ntBASIC5.1□□□□□ -1.59
HOXC4P09017 AC093827.1-201ENST00000480094 861 ntBASIC5.1□□□□□ -1.59
HOXC4P09017 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC4P09017 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC4P09017 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC4P09017 AC021193.1-201ENST00000511607 420 ntBASIC5.1□□□□□ -1.59
HOXC4P09017 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms