Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC005412.1-201ENST00000580812 1049 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 MTATP6P2-201ENST00000603319 678 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 AC098935.2-201ENST00000604222 466 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 AC135178.6-201ENST00000605314 398 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 MIR7155-201ENST00000615925 56 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 AL590410.1-201ENST00000617925 333 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 AC006963.1-201ENST00000624003 1052 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 MTND2P41-201ENST00000637599 773 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DOAP06340 ZNF733P-202ENST00000444809 1573 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 UGT2B24P-201ENST00000514441 1597 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.47□□□□□ -1.37
HLA-DOAP06340 ZNF658B-201ENST00000602828 3408 ntBASIC6.47□□□□□ -1.37
HLA-DOAP06340 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
HLA-DOAP06340 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.46□□□□□ -1.37
HLA-DOAP06340 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
HLA-DOAP06340 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.46□□□□□ -1.37
HLA-DOAP06340 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DOAP06340 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DOAP06340 AL589994.1-201ENST00000404962 340 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 RNA5SP487-201ENST00000410186 122 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 AC106883.1-201ENST00000418805 562 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 RCC2P2-201ENST00000422174 918 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DOAP06340 RIMKLBP2-201ENST00000424737 654 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DOAP06340 AC092647.3-201ENST00000443044 633 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 IGBP1P3-201ENST00000447449 1000 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 SNORD125-201ENST00000459538 96 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 HMGN2P6-201ENST00000551091 273 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 AC106730.2-201ENST00000566641 540 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 AC005341.1-201ENST00000571086 708 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 VN1R81P-201ENST00000602085 372 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 AL139407.1-201ENST00000613826 1175 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 AC109583.2-201ENST00000617367 129 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 CASC19-222ENST00000641321 1173 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 AC011493.1-201ENST00000596753 1632 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DOAP06340 ABCA11P-202ENST00000504019 2110 ntBASIC6.46□□□□□ -1.38
HLA-DOAP06340 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DOAP06340 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOAP06340 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOAP06340 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOAP06340 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOAP06340 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 RN7SKP213-201ENST00000410746 298 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 RPL23AP27-201ENST00000415161 451 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 AC092651.1-201ENST00000426110 312 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 RPL7P56-201ENST00000429441 717 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 AC073072.2-201ENST00000447425 348 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 RPS17P5-201ENST00000498293 408 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 MTCO2P9-201ENST00000503214 694 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 AC119751.5-201ENST00000514077 770 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 RNU6-941P-201ENST00000516346 108 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 AC104115.2-201ENST00000523026 687 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 MTCYBP27-201ENST00000555160 670 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 RPL10P14-201ENST00000565265 298 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 AC084036.1-201ENST00000609190 508 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 AC096586.2-201ENST00000610260 441 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms