Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
COL1A1P02452 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL1A1P02452 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL1A1P02452 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL1A1P02452 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.14□□□□□ -1.43
COL1A1P02452 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
COL1A1P02452 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.14□□□□□ -1.43
COL1A1P02452 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.14□□□□□ -1.43
COL1A1P02452 SNORA2.3-201ENST00000383920 135 ntBASIC6.14□□□□□ -1.43
COL1A1P02452 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COL1A1P02452 Z97832.1-201ENST00000402490 328 ntBASIC6.14□□□□□ -1.43
COL1A1P02452 AL356967.1-201ENST00000406305 431 ntBASIC6.14□□□□□ -1.43
COL1A1P02452 RNA5SP113-201ENST00000410486 84 ntBASIC6.14□□□□□ -1.43
COL1A1P02452 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.14□□□□□ -1.43
COL1A1P02452 AC092570.3-201ENST00000420113 693 ntBASIC6.14□□□□□ -1.43
COL1A1P02452 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.14□□□□□ -1.43
COL1A1P02452 C4BPAP2-201ENST00000428434 478 ntBASIC6.14□□□□□ -1.43
COL1A1P02452 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.14□□□□□ -1.43
COL1A1P02452 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.14□□□□□ -1.43
COL1A1P02452 AC016772.1-201ENST00000444170 1261 ntBASIC6.14□□□□□ -1.43
COL1A1P02452 AC112498.1-201ENST00000444401 332 ntBASIC6.14□□□□□ -1.43
COL1A1P02452 AC091153.1-201ENST00000466297 402 ntBASIC6.14□□□□□ -1.43
COL1A1P02452 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.14□□□□□ -1.43
COL1A1P02452 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.14□□□□□ -1.43
COL1A1P02452 AC022360.1-201ENST00000521058 340 ntBASIC6.14□□□□□ -1.43
COL1A1P02452 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.14□□□□□ -1.43
COL1A1P02452 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL1A1P02452 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL1A1P02452 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL1A1P02452 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL1A1P02452 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL1A1P02452 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.14□□□□□ -1.43
COL1A1P02452 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL1A1P02452 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
COL1A1P02452 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC6.13□□□□□ -1.43
COL1A1P02452 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.13□□□□□ -1.43
COL1A1P02452 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL1A1P02452 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
COL1A1P02452 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.13□□□□□ -1.43
COL1A1P02452 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL1A1P02452 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.13□□□□□ -1.43
COL1A1P02452 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL1A1P02452 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL1A1P02452 BX284613.1-201ENST00000452221 1641 ntBASIC6.13□□□□□ -1.43
COL1A1P02452 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL1A1P02452 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COL1A1P02452 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL1A1P02452 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL1A1P02452 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.13□□□□□ -1.43
COL1A1P02452 U3.32-201ENST00000408116 212 ntBASIC6.13□□□□□ -1.43
COL1A1P02452 RN7SKP16-201ENST00000410180 299 ntBASIC6.13□□□□□ -1.43
COL1A1P02452 RN7SKP100-201ENST00000411258 284 ntBASIC6.13□□□□□ -1.43
COL1A1P02452 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.13□□□□□ -1.43
COL1A1P02452 RPL5P25-201ENST00000441148 775 ntBASIC6.13□□□□□ -1.43
COL1A1P02452 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.13□□□□□ -1.43
COL1A1P02452 NDUFA12P1-201ENST00000455914 406 ntBASIC6.13□□□□□ -1.43
COL1A1P02452 AC063943.1-201ENST00000465434 453 ntBASIC6.13□□□□□ -1.43
COL1A1P02452 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.13□□□□□ -1.43
COL1A1P02452 GAPDHP56-201ENST00000506031 988 ntBASIC6.13□□□□□ -1.43
COL1A1P02452 AL512310.9-201ENST00000553311 948 ntBASIC6.13□□□□□ -1.43
COL1A1P02452 AC019322.1-201ENST00000571869 389 ntBASIC6.13□□□□□ -1.43
COL1A1P02452 AC019193.2-201ENST00000610012 634 ntBASIC6.13□□□□□ -1.43
COL1A1P02452 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.13□□□□□ -1.43
COL1A1P02452 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL1A1P02452 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
COL1A1P02452 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL1A1P02452 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.13□□□□□ -1.43
COL1A1P02452 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
COL1A1P02452 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL1A1P02452 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL1A1P02452 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.12□□□□□ -1.43
COL1A1P02452 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
COL1A1P02452 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL1A1P02452 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
COL1A1P02452 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL1A1P02452 RPS27AP6-201ENST00000427962 448 ntBASIC6.12□□□□□ -1.43
COL1A1P02452 AC016712.1-201ENST00000431088 378 ntBASIC6.12□□□□□ -1.43
COL1A1P02452 AC046176.1-201ENST00000435260 1170 ntBASIC6.12□□□□□ -1.43
COL1A1P02452 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.12□□□□□ -1.43
COL1A1P02452 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.12□□□□□ -1.43
COL1A1P02452 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.12□□□□□ -1.43
COL1A1P02452 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.12□□□□□ -1.43
COL1A1P02452 RN7SL385P-201ENST00000468873 276 ntBASIC6.12□□□□□ -1.43
COL1A1P02452 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.12□□□□□ -1.43
COL1A1P02452 AC021193.1-201ENST00000511607 420 ntBASIC6.12□□□□□ -1.43
COL1A1P02452 AC012339.2-201ENST00000523996 453 ntBASIC6.12□□□□□ -1.43
COL1A1P02452 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.12□□□□□ -1.43
COL1A1P02452 MORF4L1P3-201ENST00000525966 950 ntBASIC6.12□□□□□ -1.43
COL1A1P02452 AC027369.5-201ENST00000533838 755 ntBASIC6.12□□□□□ -1.43
COL1A1P02452 AP006289.1-201ENST00000538089 277 ntBASIC6.12□□□□□ -1.43
COL1A1P02452 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL1A1P02452 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL1A1P02452 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
COL1A1P02452 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL1A1P02452 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL1A1P02452 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.12□□□□□ -1.43
COL1A1P02452 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL1A1P02452 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL1A1P02452 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL1A1P02452 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms