Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.18□□□□□ -1.42
HDAC6Q9UBN7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.18□□□□□ -1.42
HDAC6Q9UBN7 AP001029.2-203ENST00000589795 4910 ntBASIC6.18□□□□□ -1.42
HDAC6Q9UBN7 MTCO1P7-201ENST00000419523 1542 ntBASIC6.18□□□□□ -1.42
HDAC6Q9UBN7 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC6Q9UBN7 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC6Q9UBN7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HDAC6Q9UBN7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC6Q9UBN7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HDAC6Q9UBN7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.18□□□□□ -1.42
HDAC6Q9UBN7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
HDAC6Q9UBN7 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC6Q9UBN7 AC020656.2-201ENST00000613291 5309 ntBASIC6.18□□□□□ -1.42
HDAC6Q9UBN7 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 RPL23P2-201ENST00000320371 421 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 U3.2-201ENST00000362981 210 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 U8.4-201ENST00000363626 134 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 OR1F12-201ENST00000402365 945 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AL356806.1-201ENST00000422524 916 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 VN1R21P-201ENST00000426703 765 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AC005033.1-201ENST00000428904 813 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 ZFAND6P1-201ENST00000434138 605 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 RPL12P18-201ENST00000437175 325 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 MTCO3P43-201ENST00000440974 771 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 MEMO1P4-201ENST00000453590 386 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AL035090.1-201ENST00000454835 332 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 RPSAP50-201ENST00000481955 852 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 RPS26P24-201ENST00000497656 331 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 GOLGA5P1-201ENST00000507317 980 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AC147055.3-201ENST00000510547 851 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 MIR4700-201ENST00000578311 74 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 MIR6133-201ENST00000617057 108 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AC090510.2-201ENST00000617465 629 ntBASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.17□□□□□ -1.42
HDAC6Q9UBN7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 SNORA16A-201ENST00000384342 137 ntBASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 RPL11P3-201ENST00000395256 523 ntBASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 AL589994.1-201ENST00000404962 340 ntBASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 FAR1P1-201ENST00000427163 934 ntBASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 AC105399.1-202ENST00000447303 205 ntBASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 RPS7P6-201ENST00000485777 579 ntBASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 GLUD1P3-202ENST00000508551 200 ntBASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 RNU6-1334P-201ENST00000516032 105 ntBASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 RNU6-760P-201ENST00000516078 97 ntBASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 KCTD9P6-201ENST00000522306 950 ntBASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 OR11J2P-201ENST00000555298 907 ntBASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.16□□□□□ -1.42
HDAC6Q9UBN7 LINC00557-201ENST00000563184 1279 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms