Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RPL18AP2-201ENST00000450007 482 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AC092634.4-203ENST00000451395 448 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AC017104.1-203ENST00000454416 466 ntTSL 3 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AL035090.1-201ENST00000454835 332 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 RPS20P21-201ENST00000466859 343 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 RN7SL209P-201ENST00000488309 276 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 ENPP7P10-201ENST00000504828 933 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 SNX18P24-201ENST00000505249 671 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 SRD5A3-AS1-202ENST00000510637 926 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 MTCO1P35-201ENST00000515270 228 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 RNU6-941P-201ENST00000516346 108 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 IGLV3-13-201ENST00000518475 223 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AC091980.1-201ENST00000524262 288 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 OR4R3P-201ENST00000525084 838 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AP003497.1-201ENST00000528472 562 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 BRD9P1-201ENST00000529855 560 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 OR4R1P-201ENST00000529879 463 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 GLYCAM1-201ENST00000546596 285 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 ITFG2-AS1-203ENST00000547794 442 ntTSL 2 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AC009779.4-201ENST00000554248 611 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AC002519.2-203ENST00000567043 837 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 FRG2MP-201ENST00000613317 856 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AC244472.5-201ENST00000619103 344 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 MIR6742-201ENST00000622338 62 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AL022329.3-201ENST00000624255 352 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AL589666.2-201ENST00000624603 618 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 EIF4BP2-201ENST00000416702 1794 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AL121835.2-201ENST00000624253 3502 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AL390728.4-201ENST00000421406 1465 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 LAIR2-202ENST00000351841 538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 Y_RNA.157-201ENST00000363638 102 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 LY6G6E-225ENST00000383418 383 ntAPPRIS P5 TSL 1 (best) BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 RNU6-178P-201ENST00000384631 104 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 MIR185-201ENST00000385288 82 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC006511.2-201ENST00000388966 660 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 SNORA74B-201ENST00000391100 201 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 RNU2-62P-201ENST00000410868 191 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 RSU1P3-201ENST00000412878 835 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AL773545.3-201ENST00000414297 706 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 FAM213AP1-201ENST00000418757 668 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 HMGN1P6-201ENST00000438508 291 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 RPS29P3-201ENST00000439929 171 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AL365356.2-201ENST00000441526 196 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AL450996.1-201ENST00000445574 1202 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 TPT1P14-201ENST00000448018 505 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 SLC25A18P1-201ENST00000449385 454 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AP000266.1-201ENST00000450936 582 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 RPL22-208ENST00000497965 786 ntTSL 2 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC233724.8-201ENST00000504574 234 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC233724.3-201ENST00000512613 128 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 RNU6-410P-201ENST00000517006 107 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC124290.2-201ENST00000519431 286 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC107934.1-201ENST00000522215 217 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 PHBP17-201ENST00000528576 541 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC113143.1-201ENST00000534670 301 ntTSL 2 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC083805.2-201ENST00000549683 610 ntTSL 2 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC063949.1-201ENST00000552900 865 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AL022318.2-201ENST00000558766 258 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC138512.1-201ENST00000563190 434 ntTSL 3 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 KC877982.1-201ENST00000602313 470 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 OR6R2P-201ENST00000609216 300 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC107294.2-201ENST00000610001 701 ntTSL 3 BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms