Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 VN1R87P-201ENST00000596706 487 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC000068.2-201ENST00000608816 460 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 MIR7155-201ENST00000615925 56 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC016957.2-201ENST00000616998 848 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 OR51C1P-202ENST00000641159 1444 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AL592494.2-201ENST00000425455 1548 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.77□□□□□ -1.48
EBF3Q9H4W6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 MTCO1P4-201ENST00000520516 1409 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 RNU4-40P-201ENST00000364351 143 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 RNA5SP187-201ENST00000384400 119 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 METTL15P3-201ENST00000415522 1221 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 OR6D1P-201ENST00000436165 939 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 RPS15AP29-201ENST00000445539 400 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 RPS26P41-201ENST00000450370 284 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AURKAPS1-201ENST00000451805 1212 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 LARP7P4-201ENST00000481075 878 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AC072052.1-201ENST00000496556 306 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 RPSAP51-201ENST00000497462 645 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AP006245.2-201ENST00000522004 300 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AGGF1P7-201ENST00000562369 913 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AC125494.2-201ENST00000602431 657 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 SNORA35B-201ENST00000607417 129 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AC008833.1-201ENST00000611633 691 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 RPSAP73-201ENST00000614820 330 ntBASIC5.77□□□□□ -1.49
EBF3Q9H4W6 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
EBF3Q9H4W6 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 RNA5SP183-201ENST00000362452 119 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AL390774.1-201ENST00000411924 246 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 SSR1P2-201ENST00000415208 787 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 FAR1P1-201ENST00000427163 934 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 MTCO1P57-201ENST00000432182 261 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 MTCYBP14-201ENST00000457471 715 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 RN7SL826P-201ENST00000479724 288 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 RPS21P4-201ENST00000487122 248 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AC105420.1-201ENST00000504389 582 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AC002456.2-201ENST00000509356 380 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 HMGN1P15-201ENST00000513870 295 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 RNU6-964P-201ENST00000516524 69 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AC078899.1-201ENST00000521432 1185 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms