Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 RPS4XP21-201ENST00000603814 750 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC023158.2-201ENST00000614876 543 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC121761.2-201ENST00000617300 689 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC023509.5-201ENST00000617434 807 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC079248.2-201ENST00000623779 326 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AL355488.2-201ENST00000609909 2850 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC046144.1-201ENST00000478559 1853 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 OR52E6-202ENST00000379946 954 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 RNU6-317P-201ENST00000384031 107 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 SNORD65.1-201ENST00000390889 71 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AL023284.3-201ENST00000407767 334 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 RPL7AP51-201ENST00000422016 760 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 SPATA20P1-201ENST00000423089 438 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 DPRXP1-201ENST00000426312 460 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 RPS24P8-201ENST00000431490 402 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AL365220.1-201ENST00000432923 399 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 ATP5F1P1-201ENST00000433775 569 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 USP9YP22-201ENST00000438971 294 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 UBE2V1P5-201ENST00000440070 405 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC092809.1-201ENST00000441469 474 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC092601.1-201ENST00000444526 383 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 MEF2AP1-201ENST00000454867 863 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AL109741.2-201ENST00000455561 343 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 NMNAT1P3-201ENST00000457517 888 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 RN7SL492P-201ENST00000460700 295 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 RN7SL168P-201ENST00000463821 279 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AL161747.1-201ENST00000480068 358 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC108734.3-201ENST00000481241 1165 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 IGBP1P5-201ENST00000507524 1000 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 MTND1P22-201ENST00000510572 951 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC138832.1-201ENST00000522871 556 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AP001000.1-201ENST00000526843 742 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC092865.1-201ENST00000544395 1023 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC023310.2-201ENST00000553844 547 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 HIGD1AP17-201ENST00000554576 276 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC107958.1-201ENST00000556576 290 ntBASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM55Q9BYV6 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms