Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
ABCA3Q99758 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
ABCA3Q99758 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
ABCA3Q99758 ECM1P2-201ENST00000503354 1577 ntBASIC6.65□□□□□ -1.35
ABCA3Q99758 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
ABCA3Q99758 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.65□□□□□ -1.35
ABCA3Q99758 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC6.64□□□□□ -1.35
ABCA3Q99758 RN7SKP185-201ENST00000362813 326 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 RPL17P50-201ENST00000396131 546 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 ATP5HP3-201ENST00000396994 486 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 RPEP3-201ENST00000425462 676 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.64□□□□□ -1.35
ABCA3Q99758 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.64□□□□□ -1.35
ABCA3Q99758 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.64□□□□□ -1.35
ABCA3Q99758 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.64□□□□□ -1.35
ABCA3Q99758 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.64□□□□□ -1.35
ABCA3Q99758 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.64□□□□□ -1.35
ABCA3Q99758 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
ABCA3Q99758 AC068831.4-201ENST00000556118 109 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.64□□□□□ -1.35
ABCA3Q99758 AC023575.1-201ENST00000580510 358 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 MIR6716-201ENST00000613413 80 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ABCA3Q99758 AC069542.2-201ENST00000624816 216 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.64□□□□□ -1.35
ABCA3Q99758 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ABCA3Q99758 AC104964.3-201ENST00000606115 2860 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.64□□□□□ -1.35
ABCA3Q99758 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.64□□□□□ -1.35
ABCA3Q99758 AC004076.2-201ENST00000620532 3323 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 AC093671.1-201ENST00000624981 2929 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ABCA3Q99758 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.64□□□□□ -1.35
ABCA3Q99758 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
ABCA3Q99758 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.64□□□□□ -1.35
ABCA3Q99758 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.64□□□□□ -1.35
ABCA3Q99758 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ABCA3Q99758 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.64□□□□□ -1.35
ABCA3Q99758 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ABCA3Q99758 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ABCA3Q99758 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
ABCA3Q99758 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.64□□□□□ -1.35
ABCA3Q99758 ATG4AP1-201ENST00000416893 538 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 AL645608.4-201ENST00000423619 154 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.64□□□□□ -1.35
ABCA3Q99758 IGBP1P4-201ENST00000503202 879 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 AC093840.1-201ENST00000511599 336 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.64□□□□□ -1.35
ABCA3Q99758 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.64□□□□□ -1.35
ABCA3Q99758 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.64□□□□□ -1.35
ABCA3Q99758 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.64□□□□□ -1.35
ABCA3Q99758 RN7SL802P-201ENST00000577858 299 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.64□□□□□ -1.35
ABCA3Q99758 AC005191.1-201ENST00000603950 358 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 AL356218.2-201ENST00000605264 187 ntBASIC6.64□□□□□ -1.35
ABCA3Q99758 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ABCA3Q99758 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ABCA3Q99758 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ABCA3Q99758 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.64□□□□□ -1.35
ABCA3Q99758 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
ABCA3Q99758 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
ABCA3Q99758 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
ABCA3Q99758 AC007382.1-201ENST00000624376 2618 ntBASIC6.63□□□□□ -1.35
ABCA3Q99758 AL442639.1-201ENST00000625030 1899 ntBASIC6.63□□□□□ -1.35
ABCA3Q99758 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ABCA3Q99758 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.63□□□□□ -1.35
ABCA3Q99758 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
ABCA3Q99758 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
ABCA3Q99758 MIR298-201ENST00000401212 88 ntBASIC6.63□□□□□ -1.35
ABCA3Q99758 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.63□□□□□ -1.35
ABCA3Q99758 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.63□□□□□ -1.35
ABCA3Q99758 AL732292.1-201ENST00000426692 226 ntBASIC6.63□□□□□ -1.35
ABCA3Q99758 RPL34P27-201ENST00000428810 349 ntBASIC6.63□□□□□ -1.35
ABCA3Q99758 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.63□□□□□ -1.35
ABCA3Q99758 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.63□□□□□ -1.35
ABCA3Q99758 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
ABCA3Q99758 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
ABCA3Q99758 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.63□□□□□ -1.35
ABCA3Q99758 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.63□□□□□ -1.35
ABCA3Q99758 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
ABCA3Q99758 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ABCA3Q99758 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
ABCA3Q99758 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.63□□□□□ -1.35
ABCA3Q99758 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.62□□□□□ -1.35
ABCA3Q99758 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
ABCA3Q99758 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.62□□□□□ -1.35
ABCA3Q99758 AC016251.2-201ENST00000623393 3089 ntBASIC6.62□□□□□ -1.35
ABCA3Q99758 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.62□□□□□ -1.35
ABCA3Q99758 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
ABCA3Q99758 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC6.62□□□□□ -1.35
ABCA3Q99758 RAD23BP1-201ENST00000421404 1227 ntBASIC6.62□□□□□ -1.35
ABCA3Q99758 AL389915.1-201ENST00000422463 466 ntBASIC6.62□□□□□ -1.35
ABCA3Q99758 TRGV7-201ENST00000427089 353 ntBASIC6.62□□□□□ -1.35
ABCA3Q99758 AC010326.1-201ENST00000462726 602 ntBASIC6.62□□□□□ -1.35
ABCA3Q99758 RN7SL189P-201ENST00000468631 289 ntBASIC6.62□□□□□ -1.35
ABCA3Q99758 RPS12P31-201ENST00000491419 398 ntBASIC6.62□□□□□ -1.35
ABCA3Q99758 AL049839.1-201ENST00000556151 657 ntBASIC6.62□□□□□ -1.35
ABCA3Q99758 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.62□□□□□ -1.35
ABCA3Q99758 AC010480.1-201ENST00000624823 684 ntBASIC6.62□□□□□ -1.35
ABCA3Q99758 AC107068.1-201ENST00000563286 4218 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms