Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC013262.1-201ENST00000426710 252 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AL022331.1-201ENST00000429025 477 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 HMGB3P24-201ENST00000433260 622 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC011476.1-201ENST00000466725 307 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC094085.1-201ENST00000468914 584 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC009120.1-201ENST00000493458 473 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 SUMO1P1-201ENST00000497904 306 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC021146.7-201ENST00000509604 775 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC084824.2-201ENST00000548906 345 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AGGF1P7-201ENST00000562369 913 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AP001357.1-201ENST00000586304 1053 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AF230666.2-201ENST00000602328 725 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC108865.2-201ENST00000606881 432 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC008759.3-201ENST00000613300 508 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC073342.3-201ENST00000624211 193 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AL390318.1-201ENST00000624564 687 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC087565.3-203ENST00000641018 837 ntBASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP3Q96JB5 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 OR52B3P-201ENST00000314715 928 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 MIR375-201ENST00000362103 64 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 RNU1-136P-201ENST00000384181 164 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 RNU6-729P-201ENST00000384399 107 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 RNU6-584P-201ENST00000410350 95 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 RPS6P23-201ENST00000413224 722 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 BTF3P9-201ENST00000418784 283 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 MTCYBP7-201ENST00000419540 1134 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 MTCO2P17-201ENST00000424336 677 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 TMEM183AP1-205ENST00000432739 290 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 HMGB3P10-201ENST00000434734 572 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 AL096829.2-201ENST00000446582 742 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 RPL7P55-201ENST00000450522 746 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 RPS17P15-201ENST00000475609 349 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 HNRNPCP1-201ENST00000556181 766 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 AC106730.2-201ENST00000566641 540 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 AC015802.2-201ENST00000589690 189 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 AC079880.2-201ENST00000603790 1213 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 AL121652.1-201ENST00000608851 448 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 AC022400.9-201ENST00000623633 273 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 AC004076.2-201ENST00000620532 3323 ntBASIC6.4□□□□□ -1.38
CDK5RAP3Q96JB5 AL645568.2-201ENST00000432815 1337 ntBASIC6.4□□□□□ -1.39
CDK5RAP3Q96JB5 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDK5RAP3Q96JB5 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDK5RAP3Q96JB5 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.4□□□□□ -1.39
CDK5RAP3Q96JB5 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC018809.2-201ENST00000602436 3823 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 U3.10-201ENST00000364459 214 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC087752.1-201ENST00000391360 558 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 SNORA79B-201ENST00000410557 148 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 RMRPP5-201ENST00000411156 267 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 TATDN1P1-201ENST00000414123 891 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 NENFP1-201ENST00000419476 466 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms