Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNA5SP232-201ENST00000364144 119 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 SNORD115-48-201ENST00000364764 76 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 RNA5SP30-201ENST00000365552 115 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 RNU6-225P-201ENST00000384613 103 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AL359885.1-201ENST00000415786 903 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 RIMKLBP2-201ENST00000424737 654 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 IGBP1P3-201ENST00000447449 1000 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 PPIAP27-201ENST00000453800 265 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC021193.1-201ENST00000511607 420 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 snoU109.6-201ENST00000516831 118 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC026688.1-201ENST00000520639 1168 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC087272.1-201ENST00000523624 533 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 HMGN2P36-201ENST00000529541 409 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC007956.1-201ENST00000555623 542 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC093591.2-201ENST00000565254 3843 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC021483.2-201ENST00000567415 758 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AP001437.1-201ENST00000608783 456 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 HPVC1-201ENST00000629899 1198 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AL034549.2-201ENST00000618285 3373 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC010329.2-201ENST00000595195 2737 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 U3.7-201ENST00000363668 216 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 RN7SKP222-201ENST00000410651 315 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 BX119321.1-201ENST00000428912 797 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 ZNF965P-201ENST00000432501 817 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 MTCO3P43-201ENST00000440974 771 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 XKRY2-201ENST00000442362 1093 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC009963.3-201ENST00000458090 486 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC089999.1-201ENST00000460336 374 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC021006.1-201ENST00000489849 553 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC021106.1-201ENST00000509020 1058 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC091912.1-201ENST00000511351 248 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 NMNAT1P5-201ENST00000559657 841 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC084759.1-201ENST00000561168 290 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC138207.8-204ENST00000579588 527 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 MIR4311-201ENST00000580794 100 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC040174.2-201ENST00000602701 465 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms