Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL356863.1-201ENST00000623378 1080 ntBASIC6.96□□□□□ -1.3
SMC1BQ8NDV3 AC132068.1-201ENST00000623805 459 ntBASIC6.96□□□□□ -1.3
SMC1BQ8NDV3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.96□□□□□ -1.3
SMC1BQ8NDV3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
SMC1BQ8NDV3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
SMC1BQ8NDV3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SMC1BQ8NDV3 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SMC1BQ8NDV3 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.96□□□□□ -1.3
SMC1BQ8NDV3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.96□□□□□ -1.3
SMC1BQ8NDV3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SMC1BQ8NDV3 AC007842.1-201ENST00000597336 2039 ntBASIC6.96□□□□□ -1.3
SMC1BQ8NDV3 SEPT7P7-201ENST00000420492 1301 ntBASIC6.96□□□□□ -1.3
SMC1BQ8NDV3 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SMC1BQ8NDV3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.96□□□□□ -1.3
SMC1BQ8NDV3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC007159.1-201ENST00000566529 4706 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC022034.1-201ENST00000512867 2156 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AL451142.1-201ENST00000375867 775 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AL360271.1-201ENST00000395679 510 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 RPS4XP9-201ENST00000405151 780 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC093162.1-201ENST00000419682 124 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 PTP4A1P7-201ENST00000423476 514 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AL360081.1-201ENST00000428299 555 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 RPL6P5-201ENST00000445678 828 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AL161722.1-201ENST00000446972 1032 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC069277.2-201ENST00000454211 432 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC002075.1-201ENST00000457396 676 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC104164.1-201ENST00000460282 590 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC068587.2-201ENST00000478386 781 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC105233.1-201ENST00000498840 781 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 SNRPCP2-201ENST00000504370 475 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC110775.1-201ENST00000513721 462 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC010476.1-201ENST00000519111 851 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 BUD31P1-201ENST00000521828 359 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 BNIP3P1-201ENST00000547295 580 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC067852.5-201ENST00000589299 310 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 MTCO2P2-201ENST00000591258 225 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC011492.1-201ENST00000600023 315 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC021851.1-201ENST00000608537 1082 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC005021.1-201ENST00000608730 355 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC021422.1-201ENST00000621212 473 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC015722.2-201ENST00000622210 551 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC063952.1-203ENST00000634410 658 ntBASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.95□□□□□ -1.3
SMC1BQ8NDV3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 RNU4-2-201ENST00000365668 141 ntBASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 MIR433-201ENST00000384837 93 ntBASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 MIR192-201ENST00000384915 110 ntBASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 RPS4XP5-201ENST00000419038 768 ntBASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 RPL5P22-201ENST00000480199 884 ntBASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AC009120.1-201ENST00000493458 473 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms