Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC005363.1-201ENST00000530779 351 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC124916.2-201ENST00000604416 224 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC073137.1-201ENST00000605636 634 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC037198.3-201ENST00000616754 526 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 SNX18P12-201ENST00000624821 759 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 CASC19-222ENST00000641321 1173 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC010329.2-201ENST00000595195 2737 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC009229.4-201ENST00000623854 1947 ntBASIC5.05□□□□□ -1.6
C11orf88Q6PI97 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
C11orf88Q6PI97 AC011933.2-201ENST00000578539 2790 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AC235565.1-201ENST00000456962 1325 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AC114546.3-201ENST00000623582 1734 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 COX6B1P3-201ENST00000312310 260 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 RN7SKP275-201ENST00000364626 301 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 RNU4-31P-201ENST00000384211 141 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 MIR142-201ENST00000384835 87 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AL157702.1-201ENST00000398764 426 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AC245096.1-201ENST00000413104 546 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AL133482.1-201ENST00000415988 498 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 RPS7P8-201ENST00000418311 581 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AC019050.1-201ENST00000418508 492 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 FO393419.3-201ENST00000428741 282 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 PPIAP10-201ENST00000438675 458 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 SOCS5P1-201ENST00000440415 949 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 CXCR2P1-202ENST00000443392 1074 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 GAPDHP23-201ENST00000444823 993 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 RPL12P39-201ENST00000455456 496 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 ACA64.4-201ENST00000459070 127 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 ZNF519P4-201ENST00000514008 125 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AL121594.2-201ENST00000541658 472 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AC090826.1-203ENST00000569235 490 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AC110743.1-201ENST00000584870 478 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AL138895.2-201ENST00000603019 178 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AL354696.1-201ENST00000614652 497 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AL359742.1-201ENST00000622497 540 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms