Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 AC108738.1-201ENST00000603703 237 ntBASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 AC008115.3-201ENST00000614874 549 ntBASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 AL118522.2-201ENST00000616045 615 ntBASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 CU639417.4-201ENST00000623928 207 ntBASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 AC006963.1-201ENST00000624003 1052 ntBASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 AC007683.2-201ENST00000624681 714 ntBASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 TMEM30CP-203ENST00000637814 1035 ntBASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 TET1P1-201ENST00000426627 2301 ntBASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
ZNF549Q6P9A3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AC093671.1-201ENST00000624981 2929 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 RN7SKP69-201ENST00000365390 305 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 SNORD56.6-201ENST00000384569 71 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AC069282.1-201ENST00000411911 526 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 OR6E1P-201ENST00000414424 923 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 RPL34P3-201ENST00000421454 338 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 MTND6P12-201ENST00000428247 522 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 RPS10P18-201ENST00000442662 495 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 RPL31P53-201ENST00000457065 348 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 MTCO2P6-201ENST00000463134 685 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AC078857.1-201ENST00000469870 667 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 CR383656.1-201ENST00000484916 377 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 MTND3P12-201ENST00000559068 328 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AC084759.1-201ENST00000561168 290 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AC012616.1-201ENST00000600294 197 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AL445435.1-201ENST00000604232 665 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 MIR6861-201ENST00000618657 64 ntBASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ZNF549Q6P9A3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC005005.4-201ENST00000623789 16698 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AP001029.2-203ENST00000589795 4910 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms