Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 RPL31P44-201ENST00000447680 377 ntBASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AC092754.1-201ENST00000472975 479 ntBASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AC117525.1-201ENST00000515228 503 ntBASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 YWHABP2-201ENST00000540201 713 ntBASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AC137768.1-201ENST00000549998 553 ntBASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 MIR3908-201ENST00000579798 126 ntBASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AC011487.3-201ENST00000593607 453 ntBASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AC087283.1-201ENST00000604029 1074 ntBASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AC093799.2-201ENST00000610062 578 ntBASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AL078621.3-201ENST00000623707 2042 ntBASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 THAP12P4-201ENST00000528321 2266 ntBASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 AC068870.1-201ENST00000563737 2455 ntBASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LYSMD4Q5XG99 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 CASC19-221ENST00000641309 1382 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 HSPA8P14-201ENST00000552265 1805 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 SNURFL-201ENST00000309296 343 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AL353625.1-202ENST00000366273 571 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 MIR600-201ENST00000385007 98 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AL390879.1-201ENST00000439143 386 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AC098583.1-201ENST00000480875 255 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 OR52A4P-202ENST00000481634 799 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 ACTR6P1-201ENST00000514311 1104 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AP001804.2-201ENST00000533932 910 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AP002373.2-201ENST00000541631 1060 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AF230666.2-201ENST00000602328 725 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AL021368.1-201ENST00000607490 540 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AL159169.2-201ENST00000610061 1269 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 OR4F13P-202ENST00000560066 2054 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 AL442128.2-201ENST00000620246 1824 ntBASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LYSMD4Q5XG99 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 CDC27P2-201ENST00000425026 1922 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AC245100.2-201ENST00000454544 1679 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms