Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXF1Q12946 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
FOXF1Q12946 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXF1Q12946 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
FOXF1Q12946 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
FOXF1Q12946 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXF1Q12946 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXF1Q12946 AC005005.4-201ENST00000623789 16698 ntBASIC4.68□□□□□ -1.66
FOXF1Q12946 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXF1Q12946 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
FOXF1Q12946 SMG1P7-201ENST00000565246 2704 ntBASIC4.68□□□□□ -1.66
FOXF1Q12946 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
FOXF1Q12946 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FOXF1Q12946 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXF1Q12946 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FOXF1Q12946 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXF1Q12946 MIR1182-201ENST00000408363 97 ntBASIC4.68□□□□□ -1.66
FOXF1Q12946 BX510359.3-201ENST00000422168 306 ntBASIC4.68□□□□□ -1.66
FOXF1Q12946 REREP1Y-201ENST00000422655 198 ntBASIC4.68□□□□□ -1.66
FOXF1Q12946 AC046176.1-201ENST00000435260 1170 ntBASIC4.68□□□□□ -1.66
FOXF1Q12946 REREP2Y-201ENST00000439103 200 ntBASIC4.68□□□□□ -1.66
FOXF1Q12946 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FOXF1Q12946 AC006499.3-201ENST00000506077 748 ntBASIC4.68□□□□□ -1.66
FOXF1Q12946 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.68□□□□□ -1.66
FOXF1Q12946 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
FOXF1Q12946 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.68□□□□□ -1.66
FOXF1Q12946 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.68□□□□□ -1.66
FOXF1Q12946 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.68□□□□□ -1.66
FOXF1Q12946 AC009852.2-201ENST00000567898 485 ntBASIC4.68□□□□□ -1.66
FOXF1Q12946 AC095055.1-201ENST00000603472 1113 ntBASIC4.68□□□□□ -1.66
FOXF1Q12946 AC092944.2-201ENST00000605443 889 ntBASIC4.68□□□□□ -1.66
FOXF1Q12946 AC016590.3-201ENST00000611171 753 ntBASIC4.68□□□□□ -1.66
FOXF1Q12946 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
FOXF1Q12946 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXF1Q12946 C4BPAP1-201ENST00000415474 1893 ntBASIC4.68□□□□□ -1.66
FOXF1Q12946 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXF1Q12946 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
FOXF1Q12946 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
FOXF1Q12946 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXF1Q12946 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXF1Q12946 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.68□□□□□ -1.66
FOXF1Q12946 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXF1Q12946 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXF1Q12946 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF1Q12946 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXF1Q12946 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXF1Q12946 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXF1Q12946 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF1Q12946 AL442128.2-201ENST00000620246 1824 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 AC090220.1-201ENST00000593078 1699 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 PANDAR-201ENST00000629595 1506 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXF1Q12946 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
FOXF1Q12946 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
FOXF1Q12946 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF1Q12946 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXF1Q12946 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF1Q12946 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
FOXF1Q12946 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
FOXF1Q12946 ZNF733P-202ENST00000444809 1573 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 RPL23P2-201ENST00000320371 421 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF1Q12946 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF1Q12946 AL390316.1-201ENST00000406279 553 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 RN7SKP273-201ENST00000411392 314 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
FOXF1Q12946 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXF1Q12946 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXF1Q12946 BX842559.2-201ENST00000451418 605 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 PRPF38AP1-201ENST00000451976 933 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 AC110749.1-201ENST00000462007 357 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 RN7SL177P-201ENST00000476596 299 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 AC008953.1-201ENST00000497334 318 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 AC016559.2-201ENST00000510759 359 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 FTH1P11-201ENST00000517577 551 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 IGLV2-28-201ENST00000520681 304 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXF1Q12946 AP002373.2-201ENST00000541631 1060 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF1Q12946 MIR4433B-201ENST00000581329 102 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF1Q12946 TAS2R6P-201ENST00000605022 826 ntBASIC4.67□□□□□ -1.66
FOXF1Q12946 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXF1Q12946 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXF1Q12946 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXF1Q12946 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF1Q12946 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXF1Q12946 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF1Q12946 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF1Q12946 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
FOXF1Q12946 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXF1Q12946 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXF1Q12946 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXF1Q12946 AC005261.2-201ENST00000593427 4258 ntBASIC4.66□□□□□ -1.66
FOXF1Q12946 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
FOXF1Q12946 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXF1Q12946 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.66□□□□□ -1.66
FOXF1Q12946 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms