Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RN7SKP278-201ENST00000410504 342 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.34□□□□□ -1.55
CDK3Q00526 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.34□□□□□ -1.55
CDK3Q00526 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK3Q00526 AC021876.1-201ENST00000425959 359 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 NANOGP4-201ENST00000427230 913 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 OR52B5P-201ENST00000435337 951 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 AC073465.2-201ENST00000440938 498 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 MTND5P8-201ENST00000449817 1083 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 EIF2S2P4-201ENST00000461070 984 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 AC092754.1-201ENST00000472975 479 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK3Q00526 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.34□□□□□ -1.55
CDK3Q00526 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK3Q00526 AC008638.1-201ENST00000506035 866 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 AC006499.3-201ENST00000506077 748 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 HIGD1AP14-201ENST00000507617 282 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 AC108157.1-201ENST00000510511 539 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 FABP5P6-201ENST00000510588 409 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK3Q00526 RNU6-941P-201ENST00000516346 108 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK3Q00526 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK3Q00526 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK3Q00526 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK3Q00526 RPL10P14-201ENST00000565265 298 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 AC106730.2-201ENST00000566641 540 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CDK3Q00526 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.34□□□□□ -1.55
CDK3Q00526 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.34□□□□□ -1.55
CDK3Q00526 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK3Q00526 AC040174.2-201ENST00000602701 465 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 AC009237.13-201ENST00000603193 276 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK3Q00526 OR8G7P-201ENST00000616658 848 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 AC009120.7-201ENST00000623452 780 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 OR52B5P-202ENST00000641118 1110 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK3Q00526 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK3Q00526 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
CDK3Q00526 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.34□□□□□ -1.55
CDK3Q00526 AC245100.2-201ENST00000454544 1679 ntBASIC5.34□□□□□ -1.56
CDK3Q00526 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.56
CDK3Q00526 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDK3Q00526 AL359715.3-201ENST00000569267 2123 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CDK3Q00526 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK3Q00526 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK3Q00526 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK3Q00526 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDK3Q00526 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK3Q00526 AC079097.1-201ENST00000512187 1399 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK3Q00526 AC010132.2-201ENST00000295493 1043 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 AC092681.1-201ENST00000297369 291 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 RNU6-1251P-201ENST00000364502 107 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDK3Q00526 U3.28-201ENST00000391249 210 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 DBIP1-201ENST00000401435 260 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 RNU2-72P-201ENST00000411175 163 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 BMS1P13-201ENST00000417301 885 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 AC108075.1-201ENST00000424692 529 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDK3Q00526 CNOT7P2-201ENST00000441051 832 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 AC245047.2-201ENST00000441060 530 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 Z99127.2-201ENST00000441426 334 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 RPS11P7-201ENST00000442125 465 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 AL157884.3-201ENST00000448273 1184 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK3Q00526 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK3Q00526 AC239798.3-201ENST00000454459 408 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 AL035090.1-201ENST00000454835 332 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK3Q00526 AC098583.1-201ENST00000480875 255 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK3Q00526 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK3Q00526 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK3Q00526 OR4A17P-201ENST00000526032 904 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK3Q00526 OR11H3P-201ENST00000554547 982 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.33□□□□□ -1.56
CDK3Q00526 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK3Q00526 AL133247.2-201ENST00000603236 482 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 AC013244.1-201ENST00000604279 193 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 AC093388.1-201ENST00000609166 430 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK3Q00526 AC135068.5-201ENST00000624197 983 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK3Q00526 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDK3Q00526 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDK3Q00526 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK3Q00526 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDK3Q00526 AC083837.1-201ENST00000565297 2994 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK3Q00526 AC024341.1-201ENST00000526444 1552 ntBASIC5.33□□□□□ -1.56
CDK3Q00526 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK3Q00526 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.32□□□□□ -1.56
CDK3Q00526 OR55B1P-203ENST00000641518 2602 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms