Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC118658.2-201ENST00000618697 459 ntBASIC5.42□□□□□ -1.54
CDH6P55285 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH6P55285 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
CDH6P55285 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH6P55285 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH6P55285 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH6P55285 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH6P55285 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH6P55285 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.42□□□□□ -1.54
CDH6P55285 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH6P55285 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH6P55285 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDH6P55285 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH6P55285 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH6P55285 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH6P55285 AP005435.3-201ENST00000531260 3198 ntBASIC5.41□□□□□ -1.54
CDH6P55285 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH6P55285 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CDH6P55285 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH6P55285 AC092376.2-201ENST00000622621 4116 ntBASIC5.41□□□□□ -1.54
CDH6P55285 ADAM5-202ENST00000399789 1942 ntBASIC5.41□□□□□ -1.54
CDH6P55285 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH6P55285 MTHFD2P5-201ENST00000320415 844 ntBASIC5.41□□□□□ -1.54
CDH6P55285 OR9K1P-201ENST00000326513 941 ntBASIC5.41□□□□□ -1.54
CDH6P55285 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH6P55285 RNA5SP90-201ENST00000364801 99 ntBASIC5.41□□□□□ -1.54
CDH6P55285 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH6P55285 SNORA67-201ENST00000384423 137 ntBASIC5.41□□□□□ -1.54
CDH6P55285 RPL35AP24-201ENST00000413846 330 ntBASIC5.41□□□□□ -1.54
CDH6P55285 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH6P55285 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH6P55285 AC093655.2-201ENST00000425735 631 ntBASIC5.41□□□□□ -1.54
CDH6P55285 AC046176.1-201ENST00000435260 1170 ntBASIC5.41□□□□□ -1.54
CDH6P55285 RPS29P10-201ENST00000439197 166 ntBASIC5.41□□□□□ -1.54
CDH6P55285 PPIAP20-201ENST00000449839 135 ntBASIC5.41□□□□□ -1.54
CDH6P55285 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH6P55285 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.41□□□□□ -1.54
CDH6P55285 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH6P55285 OR2AO1P-201ENST00000476497 403 ntBASIC5.41□□□□□ -1.54
CDH6P55285 AC015864.1-201ENST00000496512 544 ntBASIC5.41□□□□□ -1.54
CDH6P55285 NIFKP7-201ENST00000503365 834 ntBASIC5.41□□□□□ -1.54
CDH6P55285 MYL12BP2-201ENST00000503948 512 ntBASIC5.41□□□□□ -1.54
CDH6P55285 ATP5LP3-201ENST00000514223 304 ntBASIC5.41□□□□□ -1.54
CDH6P55285 AC012400.1-201ENST00000518452 381 ntBASIC5.41□□□□□ -1.54
CDH6P55285 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.41□□□□□ -1.54
CDH6P55285 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH6P55285 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH6P55285 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH6P55285 FKBP1AP1-201ENST00000594588 318 ntBASIC5.41□□□□□ -1.54
CDH6P55285 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH6P55285 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH6P55285 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH6P55285 AC069307.1-201ENST00000602820 447 ntBASIC5.41□□□□□ -1.54
CDH6P55285 AC015849.6-201ENST00000605454 474 ntBASIC5.41□□□□□ -1.54
CDH6P55285 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH6P55285 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH6P55285 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH6P55285 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH6P55285 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH6P55285 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH6P55285 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
CDH6P55285 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CDH6P55285 U3.3-201ENST00000362986 216 ntBASIC5.4□□□□□ -1.54
CDH6P55285 RN7SKP162-201ENST00000363605 345 ntBASIC5.4□□□□□ -1.54
CDH6P55285 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH6P55285 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH6P55285 CFL1P1-202ENST00000432948 411 ntBASIC5.4□□□□□ -1.54
CDH6P55285 AC011225.1-201ENST00000457751 369 ntBASIC5.4□□□□□ -1.54
CDH6P55285 DEFB109A-201ENST00000482450 265 ntBASIC5.4□□□□□ -1.54
CDH6P55285 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH6P55285 RPS4XP20-201ENST00000505751 772 ntBASIC5.4□□□□□ -1.54
CDH6P55285 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH6P55285 RNA5SP230-201ENST00000517039 122 ntBASIC5.4□□□□□ -1.54
CDH6P55285 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH6P55285 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH6P55285 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH6P55285 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH6P55285 AC007225.2-201ENST00000562529 256 ntBASIC5.4□□□□□ -1.54
CDH6P55285 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH6P55285 IMMP1LP3-201ENST00000604197 224 ntBASIC5.4□□□□□ -1.54
CDH6P55285 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH6P55285 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH6P55285 TCP11X1-202ENST00000622971 1372 ntBASIC5.4□□□□□ -1.55
CDH6P55285 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDH6P55285 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDH6P55285 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
CDH6P55285 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH6P55285 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH6P55285 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CDH6P55285 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH6P55285 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH6P55285 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH6P55285 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH6P55285 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CDH6P55285 AL391361.1-201ENST00000405580 489 ntBASIC5.39□□□□□ -1.55
CDH6P55285 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH6P55285 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH6P55285 AC079355.1-201ENST00000421770 223 ntBASIC5.39□□□□□ -1.55
CDH6P55285 BX119904.3-201ENST00000428194 957 ntBASIC5.39□□□□□ -1.55
CDH6P55285 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms