Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC092376.2-201ENST00000622621 4116 ntBASIC5.53□□□□□ -1.52
APOEP02649 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
APOEP02649 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
APOEP02649 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.53□□□□□ -1.52
APOEP02649 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
APOEP02649 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
APOEP02649 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
APOEP02649 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
APOEP02649 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
APOEP02649 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.52□□□□□ -1.53
APOEP02649 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.52□□□□□ -1.53
APOEP02649 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
APOEP02649 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.52□□□□□ -1.53
APOEP02649 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.52□□□□□ -1.53
APOEP02649 RN7SKP74-201ENST00000362849 309 ntBASIC5.52□□□□□ -1.53
APOEP02649 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
APOEP02649 SNORA48.4-201ENST00000391089 134 ntBASIC5.52□□□□□ -1.53
APOEP02649 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
APOEP02649 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.52□□□□□ -1.53
APOEP02649 AC090018.1-201ENST00000434369 367 ntBASIC5.52□□□□□ -1.53
APOEP02649 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.52□□□□□ -1.53
APOEP02649 AL035090.1-201ENST00000454835 332 ntBASIC5.52□□□□□ -1.53
APOEP02649 SEPT7P3-201ENST00000455017 621 ntBASIC5.52□□□□□ -1.53
APOEP02649 RN7SL177P-201ENST00000476596 299 ntBASIC5.52□□□□□ -1.53
APOEP02649 RPL7P6-201ENST00000480903 738 ntBASIC5.52□□□□□ -1.53
APOEP02649 AC058823.1-201ENST00000485315 474 ntBASIC5.52□□□□□ -1.53
APOEP02649 RPS4XP14-201ENST00000493072 781 ntBASIC5.52□□□□□ -1.53
APOEP02649 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.52□□□□□ -1.53
APOEP02649 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.52□□□□□ -1.53
APOEP02649 HIGD1AP14-201ENST00000507617 282 ntBASIC5.52□□□□□ -1.53
APOEP02649 AC098976.1-201ENST00000513014 541 ntBASIC5.52□□□□□ -1.53
APOEP02649 RNA5SP34-201ENST00000516887 130 ntBASIC5.52□□□□□ -1.53
APOEP02649 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.52□□□□□ -1.53
APOEP02649 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.52□□□□□ -1.53
APOEP02649 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.52□□□□□ -1.53
APOEP02649 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.52□□□□□ -1.53
APOEP02649 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
APOEP02649 AC099654.6-201ENST00000636487 512 ntBASIC5.52□□□□□ -1.53
APOEP02649 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
APOEP02649 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.52□□□□□ -1.53
APOEP02649 SAMMSON-213ENST00000641336 1521 ntBASIC5.52□□□□□ -1.53
APOEP02649 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
APOEP02649 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
APOEP02649 AC011493.1-201ENST00000596753 1632 ntBASIC5.52□□□□□ -1.53
APOEP02649 SCARNA15-201ENST00000607520 4325 ntBASIC5.52□□□□□ -1.53
APOEP02649 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.52□□□□□ -1.53
APOEP02649 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
APOEP02649 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
APOEP02649 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
APOEP02649 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
APOEP02649 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.51□□□□□ -1.53
APOEP02649 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
APOEP02649 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
APOEP02649 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
APOEP02649 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
APOEP02649 U3.7-201ENST00000363668 216 ntBASIC5.51□□□□□ -1.53
APOEP02649 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
APOEP02649 RNU6-171P-201ENST00000384354 107 ntBASIC5.51□□□□□ -1.53
APOEP02649 AC017019.1-201ENST00000426129 261 ntBASIC5.51□□□□□ -1.53
APOEP02649 HSPD1P12-201ENST00000429127 1069 ntBASIC5.51□□□□□ -1.53
APOEP02649 RPL19P16-201ENST00000433839 588 ntBASIC5.51□□□□□ -1.53
APOEP02649 AL163193.1-201ENST00000444895 788 ntBASIC5.51□□□□□ -1.53
APOEP02649 FAR2P1-206ENST00000449736 709 ntBASIC5.51□□□□□ -1.53
APOEP02649 OR52E3P-201ENST00000452083 936 ntBASIC5.51□□□□□ -1.53
APOEP02649 AC015864.1-201ENST00000496512 544 ntBASIC5.51□□□□□ -1.53
APOEP02649 RPS24P16-201ENST00000497294 392 ntBASIC5.51□□□□□ -1.53
APOEP02649 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.51□□□□□ -1.53
APOEP02649 RNA5SP230-201ENST00000517039 122 ntBASIC5.51□□□□□ -1.53
APOEP02649 AC022360.1-201ENST00000521058 340 ntBASIC5.51□□□□□ -1.53
APOEP02649 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.51□□□□□ -1.53
APOEP02649 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.51□□□□□ -1.53
APOEP02649 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.51□□□□□ -1.53
APOEP02649 MIR4660-201ENST00000583549 74 ntBASIC5.51□□□□□ -1.53
APOEP02649 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.51□□□□□ -1.53
APOEP02649 AC126915.2-201ENST00000610957 190 ntBASIC5.51□□□□□ -1.53
APOEP02649 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.51□□□□□ -1.53
APOEP02649 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.51□□□□□ -1.53
APOEP02649 AP002505.2-201ENST00000623585 696 ntBASIC5.51□□□□□ -1.53
APOEP02649 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
APOEP02649 AL590763.1-201ENST00000398297 1545 ntBASIC5.51□□□□□ -1.53
APOEP02649 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
APOEP02649 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
APOEP02649 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.51□□□□□ -1.53
APOEP02649 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
APOEP02649 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
APOEP02649 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.51□□□□□ -1.53
APOEP02649 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
APOEP02649 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
APOEP02649 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
APOEP02649 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.51□□□□□ -1.53
APOEP02649 SOCS5P3-201ENST00000425115 1576 ntBASIC5.5□□□□□ -1.53
APOEP02649 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
APOEP02649 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.5□□□□□ -1.53
APOEP02649 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
APOEP02649 AL449283.1-201ENST00000602631 3403 ntBASIC5.5□□□□□ -1.53
APOEP02649 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.5□□□□□ -1.53
APOEP02649 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.5□□□□□ -1.53
APOEP02649 OR9K1P-201ENST00000326513 941 ntBASIC5.5□□□□□ -1.53
APOEP02649 RNU6-249P-201ENST00000363016 102 ntBASIC5.5□□□□□ -1.53
APOEP02649 RN7SKP153-201ENST00000365026 316 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms