Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL1A1P02452 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL1A1P02452 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL1A1P02452 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.17□□□□□ -1.42
COL1A1P02452 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL1A1P02452 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL1A1P02452 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL1A1P02452 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL1A1P02452 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.17□□□□□ -1.42
COL1A1P02452 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
COL1A1P02452 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.17□□□□□ -1.42
COL1A1P02452 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL1A1P02452 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.16□□□□□ -1.42
COL1A1P02452 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL1A1P02452 AC079741.1-201ENST00000321498 212 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL1A1P02452 RN7SKP153-201ENST00000365026 316 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 OR8V1P-201ENST00000395193 873 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.16□□□□□ -1.42
COL1A1P02452 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.16□□□□□ -1.42
COL1A1P02452 AL161722.2-201ENST00000434731 981 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.16□□□□□ -1.42
COL1A1P02452 RPL36AP15-201ENST00000444514 266 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.16□□□□□ -1.42
COL1A1P02452 TPT1P12-201ENST00000448968 492 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.16□□□□□ -1.42
COL1A1P02452 RN7SL197P-201ENST00000466981 299 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 RN7SL481P-201ENST00000477764 299 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 AC008147.3-201ENST00000548666 354 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.16□□□□□ -1.42
COL1A1P02452 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.16□□□□□ -1.42
COL1A1P02452 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL1A1P02452 RN7SL290P-201ENST00000578661 300 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 AC091042.1-201ENST00000579213 173 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 AC209154.1-201ENST00000582156 337 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 AC068790.4-201ENST00000602474 263 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 AC005377.1-201ENST00000605126 456 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 AL023583.1-201ENST00000607518 1143 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.16□□□□□ -1.42
COL1A1P02452 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.16□□□□□ -1.42
COL1A1P02452 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.16□□□□□ -1.42
COL1A1P02452 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL1A1P02452 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL1A1P02452 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL1A1P02452 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.16□□□□□ -1.42
COL1A1P02452 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL1A1P02452 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL1A1P02452 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL1A1P02452 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.16□□□□□ -1.42
COL1A1P02452 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL1A1P02452 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.16□□□□□ -1.42
COL1A1P02452 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.16□□□□□ -1.42
COL1A1P02452 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.16□□□□□ -1.42
COL1A1P02452 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL1A1P02452 AC020656.2-201ENST00000613291 5309 ntBASIC6.16□□□□□ -1.42
COL1A1P02452 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL1A1P02452 RNA5SP505-201ENST00000364748 108 ntBASIC6.15□□□□□ -1.42
COL1A1P02452 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
COL1A1P02452 SNORA66-201ENST00000384792 133 ntBASIC6.15□□□□□ -1.42
COL1A1P02452 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.15□□□□□ -1.42
COL1A1P02452 RNU2-50P-201ENST00000410494 143 ntBASIC6.15□□□□□ -1.42
COL1A1P02452 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.15□□□□□ -1.42
COL1A1P02452 PRPF38AP2-201ENST00000438179 851 ntBASIC6.15□□□□□ -1.42
COL1A1P02452 RPS29P9-201ENST00000440360 171 ntBASIC6.15□□□□□ -1.42
COL1A1P02452 RBMY2TP-201ENST00000451162 947 ntBASIC6.15□□□□□ -1.42
COL1A1P02452 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.15□□□□□ -1.42
COL1A1P02452 AC111000.6-201ENST00000514471 709 ntBASIC6.15□□□□□ -1.42
COL1A1P02452 AC092709.1-201ENST00000521355 1045 ntBASIC6.15□□□□□ -1.42
COL1A1P02452 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.15□□□□□ -1.42
COL1A1P02452 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.15□□□□□ -1.42
COL1A1P02452 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.15□□□□□ -1.42
COL1A1P02452 AC073869.10-201ENST00000642016 354 ntBASIC6.15□□□□□ -1.42
COL1A1P02452 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL1A1P02452 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.15□□□□□ -1.42
COL1A1P02452 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL1A1P02452 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL1A1P02452 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL1A1P02452 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL1A1P02452 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
COL1A1P02452 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL1A1P02452 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL1A1P02452 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL1A1P02452 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
COL1A1P02452 AC004074.1-201ENST00000421810 1063 ntBASIC6.15□□□□□ -1.43
COL1A1P02452 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.15□□□□□ -1.43
COL1A1P02452 AC007559.1-201ENST00000428736 355 ntBASIC6.15□□□□□ -1.43
COL1A1P02452 OR7E125P-201ENST00000443450 846 ntBASIC6.15□□□□□ -1.43
COL1A1P02452 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.15□□□□□ -1.43
COL1A1P02452 NDUFA5P9-201ENST00000472609 340 ntBASIC6.15□□□□□ -1.43
COL1A1P02452 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL1A1P02452 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.15□□□□□ -1.43
COL1A1P02452 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.15□□□□□ -1.43
COL1A1P02452 OR5AN2P-201ENST00000534535 896 ntBASIC6.15□□□□□ -1.43
COL1A1P02452 EIF1P5-201ENST00000585002 234 ntBASIC6.15□□□□□ -1.43
COL1A1P02452 AC011453.2-201ENST00000603737 729 ntBASIC6.15□□□□□ -1.43
COL1A1P02452 AL391358.1-201ENST00000605342 190 ntBASIC6.15□□□□□ -1.43
COL1A1P02452 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
COL1A1P02452 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL1A1P02452 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms