Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFP01375 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFP01375 MIR3934-201ENST00000579806 107 ntBASIC5.06□□□□□ -1.6
TNFP01375 AL356608.1-201ENST00000610034 820 ntBASIC5.06□□□□□ -1.6
TNFP01375 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.06□□□□□ -1.6
TNFP01375 AP001784.1-201ENST00000624107 428 ntBASIC5.06□□□□□ -1.6
TNFP01375 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.06□□□□□ -1.6
TNFP01375 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFP01375 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TNFP01375 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFP01375 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFP01375 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFP01375 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
TNFP01375 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
TNFP01375 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFP01375 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFP01375 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TNFP01375 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFP01375 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFP01375 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFP01375 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFP01375 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TNFP01375 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFP01375 AL355834.1-201ENST00000556602 3965 ntBASIC5.05□□□□□ -1.6
TNFP01375 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFP01375 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFP01375 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TNFP01375 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TNFP01375 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFP01375 AC103591.2-201ENST00000265259 766 ntBASIC5.05□□□□□ -1.6
TNFP01375 RN7SKP113-201ENST00000363891 295 ntBASIC5.05□□□□□ -1.6
TNFP01375 RNA5SP223-201ENST00000365174 120 ntBASIC5.05□□□□□ -1.6
TNFP01375 RN7SKP186-201ENST00000365371 303 ntBASIC5.05□□□□□ -1.6
TNFP01375 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TNFP01375 SNORA51.8-201ENST00000384234 132 ntBASIC5.05□□□□□ -1.6
TNFP01375 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TNFP01375 Z97832.1-201ENST00000402490 328 ntBASIC5.05□□□□□ -1.6
TNFP01375 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.05□□□□□ -1.6
TNFP01375 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.05□□□□□ -1.6
TNFP01375 TAAR4P-201ENST00000454843 1039 ntBASIC5.05□□□□□ -1.6
TNFP01375 RPL35AP28-201ENST00000459730 331 ntBASIC5.05□□□□□ -1.6
TNFP01375 RN7SL443P-201ENST00000464331 290 ntBASIC5.05□□□□□ -1.6
TNFP01375 AC021193.1-201ENST00000511607 420 ntBASIC5.05□□□□□ -1.6
TNFP01375 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.05□□□□□ -1.6
TNFP01375 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.05□□□□□ -1.6
TNFP01375 OR5AZ1P-201ENST00000527448 943 ntBASIC5.05□□□□□ -1.6
TNFP01375 EDDM3DP-201ENST00000554692 434 ntBASIC5.05□□□□□ -1.6
TNFP01375 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.05□□□□□ -1.6
TNFP01375 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFP01375 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFP01375 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFP01375 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.05□□□□□ -1.6
TNFP01375 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TNFP01375 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TNFP01375 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
TNFP01375 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNFP01375 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
TNFP01375 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
TNFP01375 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNFP01375 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TNFP01375 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.04□□□□□ -1.6
TNFP01375 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.04□□□□□ -1.6
TNFP01375 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.04□□□□□ -1.6
TNFP01375 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.04□□□□□ -1.6
TNFP01375 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TNFP01375 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
TNFP01375 SNORA66-201ENST00000384792 133 ntBASIC5.04□□□□□ -1.6
TNFP01375 MIR585-201ENST00000384887 94 ntBASIC5.04□□□□□ -1.6
TNFP01375 AL158827.1-201ENST00000416300 391 ntBASIC5.04□□□□□ -1.6
TNFP01375 RPL19P16-201ENST00000433839 588 ntBASIC5.04□□□□□ -1.6
TNFP01375 PRPF38AP2-201ENST00000438179 851 ntBASIC5.04□□□□□ -1.6
TNFP01375 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.04□□□□□ -1.6
TNFP01375 TRY2P-201ENST00000448860 689 ntBASIC5.04□□□□□ -1.6
TNFP01375 RPL37AP8-201ENST00000494116 276 ntBASIC5.04□□□□□ -1.6
TNFP01375 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.04□□□□□ -1.6
TNFP01375 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.04□□□□□ -1.6
TNFP01375 COX6B1P5-201ENST00000509843 249 ntBASIC5.04□□□□□ -1.6
TNFP01375 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
TNFP01375 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.04□□□□□ -1.6
TNFP01375 BRD9P1-201ENST00000529855 560 ntBASIC5.04□□□□□ -1.6
TNFP01375 EIF4A2P5-201ENST00000529914 499 ntBASIC5.04□□□□□ -1.6
TNFP01375 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNFP01375 AP000619.2-201ENST00000546014 969 ntBASIC5.04□□□□□ -1.6
TNFP01375 NMNAT1P1-201ENST00000554095 876 ntBASIC5.04□□□□□ -1.6
TNFP01375 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.04□□□□□ -1.6
TNFP01375 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.04□□□□□ -1.6
TNFP01375 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.04□□□□□ -1.6
TNFP01375 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNFP01375 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.04□□□□□ -1.6
TNFP01375 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.04□□□□□ -1.6
TNFP01375 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.04□□□□□ -1.6
TNFP01375 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.04□□□□□ -1.6
TNFP01375 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.04□□□□□ -1.6
TNFP01375 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.04□□□□□ -1.6
TNFP01375 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.04□□□□□ -1.6
TNFP01375 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
TNFP01375 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.04□□□□□ -1.6
TNFP01375 AC007996.1-201ENST00000620414 2821 ntBASIC5.04□□□□□ -1.6
TNFP01375 AC018628.1-201ENST00000624147 3819 ntBASIC5.04□□□□□ -1.6
TNFP01375 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 310.9 ms