Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CLDN9O95484 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.08□□□□□ -1.6
CLDN9O95484 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.08□□□□□ -1.6
CLDN9O95484 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.08□□□□□ -1.6
CLDN9O95484 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.08□□□□□ -1.6
CLDN9O95484 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.08□□□□□ -1.6
CLDN9O95484 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.08□□□□□ -1.6
CLDN9O95484 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN9O95484 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.08□□□□□ -1.6
CLDN9O95484 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.08□□□□□ -1.6
CLDN9O95484 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.08□□□□□ -1.6
CLDN9O95484 SUGT1P3-202ENST00000604259 383 ntBASIC5.08□□□□□ -1.6
CLDN9O95484 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.08□□□□□ -1.6
CLDN9O95484 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN9O95484 CUL4AP1-201ENST00000514750 1863 ntBASIC5.08□□□□□ -1.6
CLDN9O95484 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
CLDN9O95484 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN9O95484 AC093849.1-201ENST00000563631 2209 ntBASIC5.08□□□□□ -1.6
CLDN9O95484 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
CLDN9O95484 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN9O95484 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN9O95484 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLDN9O95484 ADAM5-202ENST00000399789 1942 ntBASIC5.07□□□□□ -1.6
CLDN9O95484 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
CLDN9O95484 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN9O95484 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN9O95484 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN9O95484 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN9O95484 RNA5SP242-201ENST00000364171 118 ntBASIC5.07□□□□□ -1.6
CLDN9O95484 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN9O95484 RNU1-74P-201ENST00000384108 171 ntBASIC5.07□□□□□ -1.6
CLDN9O95484 RNU1-77P-201ENST00000390868 162 ntBASIC5.07□□□□□ -1.6
CLDN9O95484 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN9O95484 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN9O95484 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.07□□□□□ -1.6
CLDN9O95484 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN9O95484 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN9O95484 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.07□□□□□ -1.6
CLDN9O95484 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN9O95484 RN7SL547P-201ENST00000490793 290 ntBASIC5.07□□□□□ -1.6
CLDN9O95484 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.07□□□□□ -1.6
CLDN9O95484 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN9O95484 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN9O95484 RNA5SP373-201ENST00000517271 95 ntBASIC5.07□□□□□ -1.6
CLDN9O95484 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN9O95484 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN9O95484 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN9O95484 AC006349.1-201ENST00000555526 235 ntBASIC5.07□□□□□ -1.6
CLDN9O95484 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN9O95484 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN9O95484 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN9O95484 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN9O95484 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN9O95484 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLDN9O95484 AC008814.1-201ENST00000603797 406 ntBASIC5.07□□□□□ -1.6
CLDN9O95484 QTRT1P1-201ENST00000604344 1078 ntBASIC5.07□□□□□ -1.6
CLDN9O95484 Z95327.3-201ENST00000610385 572 ntBASIC5.07□□□□□ -1.6
CLDN9O95484 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN9O95484 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN9O95484 AL022322.2-201ENST00000624072 20397 ntBASIC5.07□□□□□ -1.6
CLDN9O95484 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN9O95484 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN9O95484 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLDN9O95484 AC027279.1-201ENST00000568885 4284 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLDN9O95484 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLDN9O95484 AC011755.1-201ENST00000623763 2049 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN9O95484 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN9O95484 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN9O95484 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLDN9O95484 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLDN9O95484 SNORA51.1-201ENST00000363243 140 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 RNU1-146P-201ENST00000364015 165 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 RNA5SP339-201ENST00000390987 122 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 AL390774.1-201ENST00000411924 246 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 AC234781.4-201ENST00000419384 244 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 FAM96AP1-201ENST00000430879 482 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 CYCSP6-201ENST00000434498 302 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 CYCSP12-201ENST00000437729 300 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN9O95484 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN9O95484 OR52Y1P-201ENST00000452418 828 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 AC108161.1-201ENST00000461060 402 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 AC091544.1-201ENST00000484702 348 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.06□□□□□ -1.6
CLDN9O95484 RPEP1-201ENST00000504507 658 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 AC011411.1-201ENST00000509592 876 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN9O95484 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLDN9O95484 AC025423.2-201ENST00000537570 439 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 AL359219.2-201ENST00000555184 348 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 RPL10P14-201ENST00000565265 298 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN9O95484 SNORD95-201ENST00000579879 68 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN9O95484 MIR4443-201ENST00000585052 53 ntBASIC5.06□□□□□ -1.6
CLDN9O95484 AL589674.2-201ENST00000604304 337 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms