Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL139407.1-201ENST00000613826 1175 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AC004477.3-201ENST00000614061 590 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AC135068.5-201ENST00000624197 983 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AC074101.1-201ENST00000637861 241 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 TET1P1-201ENST00000426627 2301 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 PCAT14-202ENST00000627127 3935 ntBASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRAPPC4Q9Y296 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 CDY11P-201ENST00000447168 1651 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 RNA5SP234-201ENST00000363916 119 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 RNA5SP242-201ENST00000364171 118 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 RNA5SP132-201ENST00000364725 118 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AL512422.1-201ENST00000407033 553 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 SNORA11.3-201ENST00000408471 128 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 RN7SKP206-201ENST00000410823 293 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 GABARAPL3-201ENST00000412799 354 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AL513325.1-201ENST00000417716 1034 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 NPM1P33-201ENST00000438918 872 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AC016724.1-201ENST00000453215 421 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 RPL35AP19-201ENST00000469425 329 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AC135999.1-201ENST00000478962 479 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 RN7SL447P-201ENST00000494711 245 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AC022360.1-201ENST00000521058 340 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AC012146.2-201ENST00000576545 416 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 SNORA11.6-201ENST00000619030 128 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AP003400.3-201ENST00000624904 346 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 MIR4302-201ENST00000638058 60 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AC073869.7-201ENST00000640874 297 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AC020633.1-201ENST00000468439 2247 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAPPC4Q9Y296 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 TRAV35-201ENST00000390462 330 ntBASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 OR3A2-201ENST00000408891 1076 ntBASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 RNA5SP487-201ENST00000410186 122 ntBASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 CHEK2P5-201ENST00000423877 246 ntBASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 OR2AH1P-201ENST00000425717 928 ntBASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 DSTNP5-201ENST00000427921 523 ntBASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 SPRYD7P1-201ENST00000443861 570 ntBASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 RPS12P31-201ENST00000491419 398 ntBASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 BTG4P1-201ENST00000510421 183 ntBASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 SUGT1P3-202ENST00000604259 383 ntBASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 AP000648.2-201ENST00000624182 404 ntBASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 AL031595.2-201ENST00000624215 19071 ntBASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms