Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 GAPDHP71-201ENST00000511530 1003 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC119751.5-201ENST00000514077 770 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC010376.1-201ENST00000522101 334 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 NPM1P35-201ENST00000533043 868 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC006530.1-201ENST00000555980 571 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC009852.2-201ENST00000567898 485 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC092121.1-201ENST00000569452 202 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC090666.1-201ENST00000578241 445 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC005242.1-201ENST00000585658 438 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 MIR132-201ENST00000591554 101 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC013244.1-201ENST00000604279 193 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 ELOCP35-201ENST00000604289 336 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AL139099.4-201ENST00000614802 114 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AP000676.4-201ENST00000624659 623 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC019226.2-201ENST00000625973 424 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 SNORA17.5-201ENST00000630429 132 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AL078621.3-201ENST00000623707 2042 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.96□□□□□ -1.45
DKK3Q9UBP4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
DKK3Q9UBP4 TCP1P3-201ENST00000414406 1498 ntBASIC5.96□□□□□ -1.45
DKK3Q9UBP4 Z83820.1-201ENST00000456978 1499 ntBASIC5.96□□□□□ -1.45
DKK3Q9UBP4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
DKK3Q9UBP4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
DKK3Q9UBP4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
DKK3Q9UBP4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
DKK3Q9UBP4 PDZK1P1-202ENST00000425209 1350 ntBASIC5.96□□□□□ -1.45
DKK3Q9UBP4 AC017002.4-201ENST00000604721 1525 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 TTC39DP-201ENST00000416781 1688 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 MIR323A-201ENST00000362199 86 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 OR7E101P-201ENST00000400428 513 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 RPS26P38-201ENST00000414476 348 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 TCEA1P2-201ENST00000420496 906 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 RPS3P2-201ENST00000421346 701 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AL354766.1-201ENST00000423396 542 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 Z77249.1-201ENST00000444622 1175 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 MYO5BP2-201ENST00000449815 1277 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AP006222.1-205ENST00000450734 457 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 NXT1P1-201ENST00000458481 316 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 RN7SL57P-201ENST00000493687 290 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AC114781.3-201ENST00000512083 142 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AC111000.6-201ENST00000514471 709 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 MORF4L1P3-201ENST00000525966 950 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 DUXAP5-201ENST00000529668 529 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AC090022.1-201ENST00000546569 311 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AL049779.3-201ENST00000557141 606 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 ZNF322P1-201ENST00000568013 1209 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 MIR3614-201ENST00000581261 86 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 MTCO2P2-201ENST00000591258 225 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AP001160.4-201ENST00000596971 382 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AC004241.3-201ENST00000611728 517 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AC084782.3-201ENST00000612282 578 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 uc_338.26-201ENST00000612659 160 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AL355974.3-201ENST00000617383 467 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AL445670.1-201ENST00000618889 801 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AL669942.2-201ENST00000620352 697 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AC126544.2-201ENST00000625174 749 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 AC103703.1-201ENST00000634783 663 ntBASIC5.96□□□□□ -1.46
DKK3Q9UBP4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms