Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC005261.2-201ENST00000593427 4258 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC097063.1-201ENST00000426714 1797 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC114774.1-201ENST00000507410 1770 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 MAPK10-338ENST00000641647 3362 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AL360270.2-201ENST00000562952 5985 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AL034549.2-201ENST00000618285 3373 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 MIR133A2-201ENST00000347538 102 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC009506.2-201ENST00000420635 840 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 NDUFB4P8-201ENST00000435351 367 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC090602.1-201ENST00000469695 252 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 RPL7AP6-201ENST00000477943 801 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC093270.2-201ENST00000486157 792 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 RN7SL808P-201ENST00000496066 299 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC147055.3-201ENST00000510547 851 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 GTF2F2P1-201ENST00000511083 675 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 OR4A43P-201ENST00000532938 908 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC134349.2-201ENST00000535136 910 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC006116.3-201ENST00000592968 361 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC009027.1-201ENST00000604510 479 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC009163.6-201ENST00000612367 342 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 Z95114.1-201ENST00000624264 14574 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC092747.4-201ENST00000620519 1861 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC068870.3-201ENST00000625077 2536 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AC114947.2-201ENST00000565748 2125 ntBASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLCF1Q9UBD9 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 AC006484.1-201ENST00000435086 1884 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 CASC19-255ENST00000641733 1385 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 RN7SKP126-201ENST00000411143 300 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 AC017078.1-201ENST00000416146 368 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 VTI1BP4-201ENST00000427516 527 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 NPM1P22-201ENST00000427761 952 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 OR6C71P-201ENST00000432580 913 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 MTCO3P17-201ENST00000443775 513 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 RN7SL610P-201ENST00000463845 291 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 AC009127.1-201ENST00000467090 155 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 AC004453.1-201ENST00000487895 408 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 AC079064.1-201ENST00000528365 362 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms